Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00168 ATGGAACCTCACACACTTACTTGCCTTTCTCTTTCTCTTCTCTTCATCAGTACTCTCATTCTTCTTTCCAACCTCAGAAAAGTGAGAAACCAAGAAAAACGTCCACCAACCCCACCTTCTTTTCCCATAATCGGTCACCTCCATCTCCTCAAACAACCTTTCTACCGAGTACTACACGATCTCTCCAACAAATACGGTCCAATTCTATCCCTCACAATCGGCTCCCGTCCCGTGGTAGTCGTCTCCTCCCCCACTGCCGTCCGTGAATGCTTCACCAAAAACGATATCGTATTTGCCAACCGCCCTCGCTTACTCTCAGGAAAATACATCAATTACAACTACACCGCCATGGGATTTGCACCGTACGGGCAGCACTGGCGCAACATGCGCCGCATCGCCACAACAGAGCTACTCTCCAACCACCGGCTCAACACGTATCTCAACATTCGAGTGGAAGAACTGAAGTTATGGGTAAAGAATAATTTGTACAAATGGAGTAGTGGGCGGGGGGATTTTGTTGTGGTGGATATGAAGTCCAAATTGAAGGAACTTTCATTCAATACGGTGATGAGGATGATCAGTGGGAAAAGGTATTACGGTGTGGAAGTGGAGGATGTGGAAGAAGCATTGGAATTTAGAGAGATAATGAAAGAGCTACTTGAACTGAGTGGGGCTACTAATGCGGCAGATTTTTTTACAATTTTGAGAGTGTTTGATATTGAAGGAGTTAAGAAGAAGATGATGAAAGCGAGTGGAAGAGCAGATGTTTTTCTACAGAAACTTATTGATGAAGAGAGAGAAAAGGGAGTTTCACGTTGGCCGAAGGAAAAACAGAAAGAGGGGAAAACGTCTATGATTCGAACTTTGCTTTCCTTGCAAGAATCTCAACCTCAGTATTACTCCGATGATATAATCAAGGGTCACGTTCTGACGATGTTGGCTGCAGGTACAGATACAACTTCAGGAACAATAGAATGGGCAATGTCACTACTTTTGAATCATCCAATGGTGATGGAGAAAGCTTGGATCGAGATAAGAGACTGTATCGGAGAAAATCAAATGGTGGAGGAAGGTGATGTGGGTAAACTAAAATATTTAGAAGCTATAATCTACGAGACTCTTCGAATGTTTCCAGCAGCTCCATTGTTGGTTCCACATGAATGCAGTGAGGATTGTAGTATTGAAGGATTTGAGATACCCAAAGGAACGATGCTGATGGTGAATGCATGGGCCATTCATAGGGATCCGAAAGTGTGGGAGGATCCCACCAGCTTTCGACCGGAGAGGTTTCTAAATTGGGAAGGTGTTGAATCGTACAAGTGGATACCTTTTGGAATGGGGAGGAGGGCTTGTCCAGGGTTTGCTCTGGCCCAACGATCTATGGGATTGACATTAGCAACTCTGATTCAGTGCTTTGAGTGGGAGAAAGTTGATGAACATGAACAAATAGACTTGTCTGAAGGGAGTGGAATCACTATGCCGAAAGCGAAAGCTTTGGAGGCAATGTGTAAACCTCGTAACTCCATGCTTCACTTGCTTGCTCAGCTTTGA 1551 44.49 MEPHTLTCLSLSLLFISTLILLSNLRKVRNQEKRPPTPPSFPIIGHLHLLKQPFYRVLHDLSNKYGPILSLTIGSRPVVVVSSPTAVRECFTKNDIVFANRPRLLSGKYINYNYTAMGFAPYGQHWRNMRRIATTELLSNHRLNTYLNIRVEELKLWVKNNLYKWSSGRGDFVVVDMKSKLKELSFNTVMRMISGKRYYGVEVEDVEEALEFREIMKELLELSGATNAADFFTILRVFDIEGVKKKMMKASGRADVFLQKLIDEEREKGVSRWPKEKQKEGKTSMIRTLLSLQESQPQYYSDDIIKGHVLTMLAAGTDTTSGTIEWAMSLLLNHPMVMEKAWIEIRDCIGENQMVEEGDVGKLKYLEAIIYETLRMFPAAPLLVPHECSEDCSIEGFEIPKGTMLMVNAWAIHRDPKVWEDPTSFRPERFLNWEGVESYKWIPFGMGRRACPGFALAQRSMGLTLATLIQCFEWEKVDEHEQIDLSEGSGITMPKAKALEAMCKPRNSMLHLLAQL* 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1404983 1407809 - Chy7G129980.1 Chy07g00168 230179

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00168 516 Pfam Cytochrome P450 35 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00168 516 PANTHER - 29 513 - -
Chy07g00168 516 SUPERFAMILY Cytochrome P450 35 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00168 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Chy07g00168 516 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00168 516 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00168 516 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00168 516 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00168 516 PANTHER CYTOCHROME P450 82C3-RELATED 29 513 - -
Chy07g00168 516 Gene3D Cytochrome P450 27 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00168 516 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00168 516 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00168 516 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00168 516 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00168 516 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00168 516 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00168 516 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00168 516 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00168 516 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00168 - - K13260 csv:101207002 1001.5
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00168 Chy-Chr7:1404983 Chy11g01853 Chy-Chr11:24799711 1.24E-172 dispersed
Chy07g00168 Chy-Chr7:1404983 Chy07g00169 Chy-Chr7:1410249 3.53E-169 tandem
Chy02g00877 Chy-Chr2:5651461 Chy07g00168 Chy-Chr7:1404983 4.91E-164 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g697 Blo01g01506 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Car09g00223 . . Bhi09g03264 . . . . . . Cla05g02084 . . . . . . . . Chy07g00168 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000014 8 19 13 8 6 18 15 17 16 19 16 18 14 17 19 19 18 9 12 19 19 25 15 12 12 20 11 24 18 21 477
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy07g00168 Chy_Chr07 FPKM 4.437069 5.248514 4.076886 3.306948 6.865759 6.359769 7.354801 0.519116 0.320446 0.384937