Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00172 ATGTTGATGAAATTTTCAGTGGTTGTATTTTCTTCGGGAATAAGATTGGAAGACGACGCTGTGGTGCCATCCTCACGACGCGAGTGGGCCGATCTAATCTCTCAACGAGAAAGAGGTCGGTCAGGGAAGGACGAAAGAATCAAGTTAACAGAGACGATCCATTATCGATTCCAAGATGAATTCACGTACCCGATGACAGAGTGTATGGCTTCAATCTGCGAACGAGTTTCTTGTGGAGACAAATTGGGGAGAAAGGCTGCTTCTAAATGGTCAGAGCTCGTCGGGAAAAGCAGAGGGAACGGCCTCAATCAGGGAGCGGATTGGCTTGGCACGAGGCTTTCTCATGGGCCCACGTGGGATTTGAATCTCCCAACCAAGAAAGCTAATGTTTCTTCTTCGGATGGAAGATGGTTCATGGATGTTTATATGAAATCTGAATCATTACAAGGAATCACAGAAGCGATTACTCATGAGGTAAATTTCATGGTGATCCCATTCCTACATCTTCTGATTTTATTCATACTTCAAATCTTCACAAATCACTTCCTTCATAGAATCCGAAATCTCCCTCCCAGCCCATTTTTTTCTCTACCCATTATAGGCCAACTATACCTCCTTAAAACCCCCCTCCACCGGACCTTATCGGAGATCTCCCGCCGTCATGGCCCAATCCTCTTCTTCCAATTCGGTTTCCGTCCAGTCCTGGTCGTTTCATCTCCGTCGGCCGCCGAGGACTGCCTATCCAAAAACGACGTCATCTTCGCCAACCGACCTCGTCTCGTTAGCGGCAAATACCTCGGGTACAATTACACAAGCCTCCTCTGGGCGCCGTACGGCGAGCATTGGCGAAACCTCCGTCGAATCTCGTCGTTAGAGATCCTTTCCAGCCACCGCCTCCAAACGCTTTCAAGTATTCGCGTGGATGAAGTCCGTACGCTGATCCGGAGACTGTACAACGCTAAAAACGACGTCGTAGACATGAGAACAGAATTTTTTGAATTGATGTTCAATATCATGATGAGAATGATCGCCGGAAAACGATATTACGGGGAAGATGTGGCAGCGAACTCGGAGGAGGCGGGGAGATTTCGAGAGATACAAGAGGAGACGTTTCGATTAAGCGGCAAGACTAATTTGGGGGACTTTTTAAGGGTTGTGAAATGGGTTAGATTGTCTAAAGGGATTGAAAATAGATTGAGGGAGTTACAGATTAAGAGGGATGATTGGATGCAGAGTTTGATTGAAGAACATCGGAAGAAAATGAATAATGCTTATAGTTCTTCTTCTTCTTCTATTCAAAGTGATGCTAAAAAGACTATGATTGAGGTTCTCCTCTCATTGCAACAAAAGGAACCTCATTATTATAAGGACGAGTATATCAGAGGCCTCATGCTCGTGTTGCTATTAGCCGGAACGGAAGGTTCCATCAATACAATGGAGTGGCTTCTATCACTATTACTCAACCACCCACACTCTCTTCAACGAGCCCGAATGGAAATCGACGACGTAGTTGGAAGAACTAATCGGCTCCTGGAGGAATCAGATCTAACCCACCTTCCTTACCTCCGTAGCCTGATCCACGAGACTCTTCGAATGTACCCGCCAGGCCCATTACTGATTCCACACGAATCGTCGGAGGATTGCCACGTTGGAGGGTTCCATGTCCCAGCAGGCACAATGTTATTCGTCAACGTATGGGCCATTCAAAACGATCCCACCGTATGGGTGGAGCCGAGGAAATTTAACCCGGATAGATTCGAAAGCGATGGAGAGGGGTTCAAATGGATGCCATTTGGGGCTGGGCGGAGGAGGTGTCCCGGCGAGGGCTTGGGGCTTCGCGTCGTTGGATTGGTTGTAGGGTCGCTGATTCAATGCTTTGAATGGGAGTCAATGGACGGAGAATGTATTGATATGAGCGAAGGTGGTGGATTGACCTTGCCCAAAGCTCTCCCCCTTCGCACCCTTTGCCGGCCACGTTCAAATGCCACACATTTGCTTTCCCAAATCTAA 2010 47.61 MLMKFSVVVFSSGIRLEDDAVVPSSRREWADLISQRERGRSGKDERIKLTETIHYRFQDEFTYPMTECMASICERVSCGDKLGRKAASKWSELVGKSRGNGLNQGADWLGTRLSHGPTWDLNLPTKKANVSSSDGRWFMDVYMKSESLQGITEAITHEVNFMVIPFLHLLILFILQIFTNHFLHRIRNLPPSPFFSLPIIGQLYLLKTPLHRTLSEISRRHGPILFFQFGFRPVLVVSSPSAAEDCLSKNDVIFANRPRLVSGKYLGYNYTSLLWAPYGEHWRNLRRISSLEILSSHRLQTLSSIRVDEVRTLIRRLYNAKNDVVDMRTEFFELMFNIMMRMIAGKRYYGEDVAANSEEAGRFREIQEETFRLSGKTNLGDFLRVVKWVRLSKGIENRLRELQIKRDDWMQSLIEEHRKKMNNAYSSSSSSIQSDAKKTMIEVLLSLQQKEPHYYKDEYIRGLMLVLLLAGTEGSINTMEWLLSLLLNHPHSLQRARMEIDDVVGRTNRLLEESDLTHLPYLRSLIHETLRMYPPGPLLIPHESSEDCHVGGFHVPAGTMLFVNVWAIQNDPTVWVEPRKFNPDRFESDGEGFKWMPFGAGRRRCPGEGLGLRVVGLVVGSLIQCFEWESMDGECIDMSEGGGLTLPKALPLRTLCRPRSNATHLLSQI* 670
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1426031 1433092 + Chy7G130020.1 Chy07g00172 230183

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00172 669 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 598 607 IPR017972 GO:0005506|GO:0016705
Chy07g00172 669 SUPERFAMILY Cytochrome P450 190 659 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00172 669 Gene3D Cytochrome P450 184 667 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00172 669 PANTHER CYTOCHROME P450 82C3-RELATED 173 668 - -
Chy07g00172 669 Pfam Cytochrome P450 191 647 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00172 669 PANTHER CYTOCHROME P450 81E8 173 668 - -
Chy07g00172 669 PRINTS P450 superfamily signature 605 616 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00172 669 PRINTS P450 superfamily signature 596 605 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00172 669 PRINTS P450 superfamily signature 524 535 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00172 669 PRINTS P450 superfamily signature 470 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00172 669 PRINTS E-class P450 group I signature 242 263 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00172 669 PRINTS E-class P450 group I signature 218 237 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00172 669 PRINTS E-class P450 group I signature 523 541 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00172 669 PRINTS E-class P450 group I signature 595 605 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00172 669 PRINTS E-class P450 group I signature 564 588 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00172 669 PRINTS E-class P450 group I signature 605 628 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00172 669 PRINTS E-class P450 group I signature 334 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00172 669 PRINTS E-class P450 group I signature 479 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00172 - - - csv:101207735 954.896
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01575 Chy-Chr3:17835930 Chy07g00172 Chy-Chr7:1426031 0 dispersed
Chy07g00172 Chy-Chr7:1426031 Chy07g00174 Chy-Chr7:1437163 0 dispersed
Chy07g00680 Chy-Chr7:6574070 Chy07g00172 Chy-Chr7:1426031 1.35E-127 dispersed
Chy07g00172 Chy-Chr7:1426031 Chy07g00173 Chy-Chr7:1433862 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g687 . . . . Bpe02g00445 . . . . . . . . . . . . . . . . . . . Cla08g01605 . . . . . . . . . . Lsi04g01506 Csa04g02458 . Cme03g02084 . . . . . . . . . . . . . . . . Cpe02g00207 . . . . . . . Cla05g02088 . . . . . . Lsi08g01509 . Chy07g00172 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000014 8 19 13 8 6 18 15 17 16 19 16 18 14 17 19 19 18 9 12 19 19 25 15 12 12 20 11 24 18 21 477
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy07g00172 Chy_Chr07 FPKM 0.67451 0.0 0.0 0.0 0.0 0.0 0.584902 0.0 0.223522 0.0