Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00174 ATGGCTATGGCTATGACTATGGGAGCTATCTTTCTTTTCATCCCTCCGTTTCTTGTCTTGTATTTCTTAACAAAGCACTTTCTCCACAACATCAGAAACCTCCCACCCACCCCTTTCCCATCACTACCTATCCTTGGCCATCTCCACCTTTTGAACAAGCCCATATACCGTGCTCTATACAACATCTCCAATCGCTATGGTCCGGTTGTGTTTCTCCGCTTAGGATCTCGTTCGGTCTTGATCGTGTCGTCTCCTTCGGCAGCAGAAGAATGTTTGACTAAGAATGACATCATCTTTGCAAACCGGCCTCGTCTCCTATTATCAAAGTGCTTCGGATACAACAATACGAATCTTGTATGGTCATCTTATGGAGACCATTGGCGCAACCTCCGTCGAATCTGTACCGTTGAAATTTTGTCCACCCATCGCCTCCACATGCTTTATATTGTTCGTTTGGAAGAGGTTAGGTCTTTGATTCAACGGCTTGTGAAACGTGAAAACCAAGTAGTTAACATGAAACATGTGTTTTTTGATCTATCTTTCAACTTGATGTTGAGAATGATTATTGGAAAACGTTTTTATGGAGATGATGTAGACGATGTTGAAGAGGCAAAATTATTTAGGGAATTACAAGCCGAGTCAAGTCGGTTGTCTGGTAAATCTAATATGGGGGATTTTATTCCATTAATGTCATGGTTGGGATTTGATTCGACTTTGGAGAAAGAGATGATTGGTTGTCAAAATGGAAGAGACGCTTTGATGCAAAGTTTAATCGAGCAACATCGAAGAAGAAGAATTACAGAAATTGACTATTCTTTTCGTGATGGAAGGAAGAAGACCTTGATTGAAGTATTATTAGAATTGCAAGAATCTGAACCTGAACAATATACCGATGAAACTATCAGAGCACTAATGCTACTTATGTTAGTAGCGGGTACAGAGACGTCAGGGAGCATAATGGAGTGGGCTCTATCTCTTCTCTTAAACCATCCAGAAATTTTAAAGAAAGCACAAACTGAAATCGACAATCAAGTTGGCCACAAACGTCTAATGGAAGAATCCGACATGGCACGCCTTCCTTACCTACGTGGCATCATCAACGAGACACTTCGGATGTACCCTCCAGCTCCATTGCTAGTACCTCATGAATCATCACAAGACTGCTCTGTTGGAGGCTACTATGTTCCACGTGGCACTATGTTATACATCAACATATGGGCCATTCAGAACGACCCCAAATTCTGGATCCACCCGGAAAAATTTGACCCAGAGAGATTTAACGACGTGGAAAGTGAAAATTACAAATTTAATTTGATGCCATTTGGGTTGGGGAGGAGGGGGTGCCCAGGAGAAGGCTTGGGCCTACGAATGATTGGGCTTGTGTTGGGCTCGTTGATTCAATGCTTTGAATGGGAGCGTCCTACTGAGGAATTAGTGGATTTGGCAGAAGGGATTGCAATCACTATGCCCAAAGCCCAAAATTTACATGCTAAATGTAGGCCCAGGCCCATGGATGTTGATATTCTGTCACAAACTAAGTCTAGCCCGGCCCGTTGA 1557 42.77 MAMAMTMGAIFLFIPPFLVLYFLTKHFLHNIRNLPPTPFPSLPILGHLHLLNKPIYRALYNISNRYGPVVFLRLGSRSVLIVSSPSAAEECLTKNDIIFANRPRLLLSKCFGYNNTNLVWSSYGDHWRNLRRICTVEILSTHRLHMLYIVRLEEVRSLIQRLVKRENQVVNMKHVFFDLSFNLMLRMIIGKRFYGDDVDDVEEAKLFRELQAESSRLSGKSNMGDFIPLMSWLGFDSTLEKEMIGCQNGRDALMQSLIEQHRRRRITEIDYSFRDGRKKTLIEVLLELQESEPEQYTDETIRALMLLMLVAGTETSGSIMEWALSLLLNHPEILKKAQTEIDNQVGHKRLMEESDMARLPYLRGIINETLRMYPPAPLLVPHESSQDCSVGGYYVPRGTMLYINIWAIQNDPKFWIHPEKFDPERFNDVESENYKFNLMPFGLGRRGCPGEGLGLRMIGLVLGSLIQCFEWERPTEELVDLAEGIAITMPKAQNLHAKCRPRPMDVDILSQTKSSPAR* 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1437163 1439334 + Chy7G130040.1 Chy07g00174 230185

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00174 518 PANTHER CYTOCHROME P450 82C3-RELATED 17 510 - -
Chy07g00174 518 Gene3D Cytochrome P450 29 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00174 518 Pfam Cytochrome P450 36 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00174 518 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00174 518 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00174 518 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00174 518 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00174 518 PANTHER CYTOCHROME P450 81E8 17 510 - -
Chy07g00174 518 SUPERFAMILY Cytochrome P450 35 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00174 518 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00174 518 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00174 518 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00174 518 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00174 518 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00174 518 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00174 518 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00174 518 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00174 518 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00174 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00174 - - - csv:101208224 1023.46
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00172 Chy-Chr7:1426031 Chy07g00174 Chy-Chr7:1437163 0 dispersed
Chy07g00174 Chy-Chr7:1437163 Chy11g01853 Chy-Chr11:24799711 1.65E-162 dispersed
Chy07g00173 Chy-Chr7:1433862 Chy07g00174 Chy-Chr7:1437163 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g685 . . . . . . . . . . Cma01g01801 . . . . . . . . . . . . . . . . . . . . . . . . Lsi04g01505 Csa04g02460 . . . . . . . . . . . . . . . . . . . Bhi09g03251 . . . . . . Cla05g02089 . . . . . . . Csa02g01911 Chy07g00174 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000014 8 19 13 8 6 18 15 17 16 19 16 18 14 17 19 19 18 9 12 19 19 25 15 12 12 20 11 24 18 21 477
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy07g00174 Chy_Chr07 FPKM 18.761549 23.466721 9.099736 7.924127 9.383144 11.638895 7.697395 7.49894 8.008422 5.459828