Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00181 ATGAGTTGCAACGGTTGCAGAGTGCTTCGAAAGGGCTGCAGCGAAGCTTGTGTTTTAAGGTCTAGTCTTCATTGGATTGATTCTCCCGAAGCTCAAGGCAACGCTACTCTGTTTCTTGCTAAATTTTTCGGCCGTAGTGATCTTTTGTCCTTCATCTCCGCCGTTCCTTATCATCAAAGACCTGCCTGTGGTCGCACAGTTAACCCAGTTAGCGGTGCCGTTGGTCTCTTGTCTACTGGGAACTGGCACGTCTGTCAGGCGGCGGCGGATACTATTCTCAACGGCGGGGTTCTCCGACCAATACCCGGAATCGAAATTTCTGGGAATCCCACGCCTAACCTTGATGATTCATCGCTTACTTTTAATACCGATGTCTGGACAACCACCACCGTACACAATCTTCAATTTTACCCATCTACTCCGTCTGATTTCCGGTGCCTTCCTGATCTCAGTCTCGGCAGAGCGAAGAATCATCATCCGTTGGAGAATCGGCGGTCTCTTGATTCCGAAGAGTCGGTCATGACTAGCTTCGGAAGCGGCGATCTTGGCGACCAACGGAAAGAAACGAAGCTTTTGAACTTATTCGTGTGA 591 49.58 MSCNGCRVLRKGCSEACVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQRPACGRTVNPVSGAVGLLSTGNWHVCQAAADTILNGGVLRPIPGIEISGNPTPNLDDSSLTFNTDVWTTTTVHNLQFYPSTPSDFRCLPDLSLGRAKNHHPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV* 197
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1489053 1489783 - Chy7G130110.1 Chy07g00181 230192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00181 196 PANTHER LOB DOMAIN-CONTAINING PROTEIN 39-LIKE 1 196 - -
Chy07g00181 196 ProSiteProfiles LOB domain profile. 1 98 IPR004883 -
Chy07g00181 196 Pfam Lateral organ boundaries (LOB) domain 2 90 IPR004883 -
Chy07g00181 196 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 196 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02365 Chy-Chr2:27514042 Chy07g00181 Chy-Chr7:1489053 2.84E-37 dispersed
Chy07g00181 Chy-Chr7:1489053 Chy10g01149 Chy-Chr10:16407999 1.87E-38 dispersed
Chy02g00852 Chy-Chr2:5430973 Chy07g00181 Chy-Chr7:1489053 1.56E-57 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18263 PF03195 LOB 2.00E-14 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00181 - - csv:101208953 388.652