Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00184 ATGGATTGTTTTGGAGGTAATTTGAGTGGAGAAGCTGGAGAATGGGATTTATGCAGCTCAATTTTATCATTAGAAGATCCGGATTATATGCATATTATTAATCCTCATCCTACTACGTCGCCAGGTTTGATGGCTGATCATGCAGCTTGGTTCTGTTCTAATTTGGATTCTAATGGTGTTGATCATTATCAGTTTCCTTGTATTGCTGCTGCTGCTGCTGTCTATGATGATTATTATGGTCATAATCATATGTCCATGTCAATTATTGATGAAGATAATAAGAATTTGGAGTCCATTTTCTCAGCCTCTAGTACTGAATTTTTGCTGCAAGAAATCGGTAGTACTGGGTTTTCTGAAGATCACAAATTTCTTAACATGGATATTGTTCAAACCCATCTAGGAGATGAAGATGATGATAATCCCTTATTCCACCACAAAAGGAAATCATCCATTGTTGCTCCTGATGATCATGATCATGATCAGAACCAGCTCATCAAACCCAATAAGAAAATTCGTACTTCAAATAATGTACAGATCAAAAGTAGGAAAGGCACAGAATCAAGTGGCAATAGCAAAAAAGTGAGCAGTACACGGCGACGGAAATGTGAAGAAGAACAAGAAAATGGAAGGTCGTCGTGTGATATGAACAGTTGCAGCAGCGATAACTCATCGGAGAATGACAATAACAATGCTTCACCAAAACCCAAAACTAGAGCCACTAGAGGCTCAGCAACTGATCCACAAAGCCTTTACGCAAGGAAGAGAAGAGAGAGAATCAATGAACGCCTTAGAATTCTGCAGAAACTTGTCCCTAATGGAACAAAGGTTGATATTAGCACAATGCTTGAGGAAGCAGTTCATTATGTTAAATTTCTGCAGCTTCAGATAAAGCTTTTGAGCTCTGATGATTTGTGGATGTATGCACCAATTGCTTACAATGGGATGGATATCGGTCTGCAGCAGAAGCTTTCTTCAATTTTATGA 984 38.62 MDCFGGNLSGEAGEWDLCSSILSLEDPDYMHIINPHPTTSPGLMADHAAWFCSNLDSNGVDHYQFPCIAAAAAVYDDYYGHNHMSMSIIDEDNKNLESIFSASSTEFLLQEIGSTGFSEDHKFLNMDIVQTHLGDEDDDNPLFHHKRKSSIVAPDDHDHDQNQLIKPNKKIRTSNNVQIKSRKGTESSGNSKKVSSTRRRKCEEEQENGRSSCDMNSCSSDNSSENDNNNASPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLQQKLSSIL* 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1509735 1511381 + Chy7G130140.1 Chy07g00184 230195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00184 327 MobiDBLite consensus disorder prediction 167 192 - -
Chy07g00184 327 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 71 325 - -
Chy07g00184 327 Gene3D - 245 301 IPR036638 GO:0046983
Chy07g00184 327 MobiDBLite consensus disorder prediction 211 247 - -
Chy07g00184 327 CDD bHLH_AtIND_like 244 306 - -
Chy07g00184 327 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 243 292 IPR011598 GO:0046983
Chy07g00184 327 SMART finulus 249 298 IPR011598 GO:0046983
Chy07g00184 327 MobiDBLite consensus disorder prediction 150 252 - -
Chy07g00184 327 MobiDBLite consensus disorder prediction 150 166 - -
Chy07g00184 327 MobiDBLite consensus disorder prediction 196 210 - -
Chy07g00184 327 PANTHER TRANSCRIPTION FACTOR BHLH54 71 325 - -
Chy07g00184 327 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 242 309 IPR036638 GO:0046983
Chy07g00184 327 Pfam Helix-loop-helix DNA-binding domain 253 293 IPR011598 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00403 Chy-Chr1:2861994 Chy07g00184 Chy-Chr7:1509735 8.07E-13 dispersed
Chy07g00184 Chy-Chr7:1509735 Chy09g00499 Chy-Chr9:4851121 5.16E-26 dispersed
Chy01g00128 Chy-Chr1:848554 Chy07g00184 Chy-Chr7:1509735 1.79E-52 wgd
Chy03g01587 Chy-Chr3:17898667 Chy07g00184 Chy-Chr7:1509735 3.62E-55 wgd
Chy07g00184 Chy-Chr7:1509735 Chy07g01715 Chy-Chr7:20896769 4.95E-55 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18265 PF00010 HLH 9.70E-09 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00184 - - csv:101209196 617.846