Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00211 ATGGCCATGGAAGCTAGTTTTGAGCCTCAGCAACATTCTCACTACCATCACCGAAGCCAGGTAACTTCAGCAGTAGCTATCTCTAACACCATGTCAAATAGCTTCTTAGCTTCTCACCACTACAACGGAGATTTTCTCTCTGTAGTGCCACTCAAGTCTGATGGGTCTCTTTGTATCATGGATTCAATCAACACATCACAACCTCAAGAAATATTGCCAAATATCTCACCAAAACTAGAAGATTTTCTTGGTGGTGCAACTCATGGAAAAGAAACCACAGCACTAAGCTTAGACAGCATATATTACAATCAAAACGCGGAGGTTGATTCAGAGAGACAACATTCTTTGAATCTTCTTAAGCAAGAAGAGCAACAACAACATGTTCTTTTTCATTCTCAGCGATATTATTCTGGAATGTTTCAATATCCGGTTGAGAATCCCAACAACGAGTCTCATATTGAAAGCTATTGTTCTGAAATAAGACATATGGAGCAGCGGATCAATGGGTGTTGCTTTGGGGGAATGAATTGCCAAGACTTAAAGCCACTTAGCTTGTCCATGAGTCCTGGTTCTCAGTCTAGTTGTGTCACTACTCCAAGTCAAATTTCTCAACCTGGACCATCCACCATGGAAATAAAGAAAAGGGCTCTGGCAAGTCAGAAGCAGCCGATCCATCGGAAGTCTATCGACACATTCGGACAAAGAACTTCACAGTACAGAGGTGTTACTAGGCATAGATGGACTGGTAGATATGAGGCTCATTTGTGGGATAATAGTTGTAAGAAGGAAGGTCAAACCAGGAAAGGAAGACAAGTTTATCTCGGTGGCTATGATATGGAGGGGAAAGCCGCAAGAGCTTATGATCTTGCAGCTATCAAGTACTGGGGTTCCTCTACACATTTAAACTTCCCGTTGAAGAACTATGAACTTGAAATTGAAGAAATGAAGAACATGAACCGCCAAGAATATGTGGCACACCTGAGAAGGAAAAGCAGTGGATTCTCCAGGGGAGCTTCTATATACAGAGGTGTAACTAGACATCATCAGCATGGGAGATGGCAAGCTCGGATCGGGAGAGTCGCTGGAAATAAAGACTTGTATCTTGGCACATTTGGCACACAAGAGGAAGCTGCAGAAGCTTATGATATAGCAGCTATCAAGTTCCGTGGTGCAAATGCCGTTACAAATTTCGACACATCGAGGTACGATGTAGAAAGGATCATAGCAAGCAGTAGCCTTCTTTCGGGAGAGTTTGCGAGGAGAAAAAAAGAACACAAACCAACCAACTCCATTGAACATAAAGAACCAAAACAGAATGTCACACAAACTGACGAGGGGTTGGAGATATCCAACAGCTTAGATTGGAGGGCAGTATTCCACGACAACCTGCTACTGAATCCAAGCGCAAGTGTCGAATCCATAGACCAAAAGTCCATGACCTCAAGCGGATACATGAATCATGTAATCGGAGTGGTCGAAACCGAAAGCTCTAATCAAGAAATTGTGAATGATTCAAGAAAGTACAAAGCTCACTTCTCCAATGCTTCCTCTGTGGTGAGCAGCCTGAGCAGCTCAAGGGAAACAAGTCCTGATAAGTCAAATGGCTCATCCTCAGTATTATTTGCAAAATCCCCATTTGGAAGCAATGGAAGTAATTGGCTTCCATCACCCCAAATGAGGCTTGCTCCTATTTCTTTGCCTGTTTGGAATGATGCATAA 1719 42.87 MAMEASFEPQQHSHYHHRSQVTSAVAISNTMSNSFLASHHYNGDFLSVVPLKSDGSLCIMDSINTSQPQEILPNISPKLEDFLGGATHGKETTALSLDSIYYNQNAEVDSERQHSLNLLKQEEQQQHVLFHSQRYYSGMFQYPVENPNNESHIESYCSEIRHMEQRINGCCFGGMNCQDLKPLSLSMSPGSQSSCVTTPSQISQPGPSTMEIKKRALASQKQPIHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEGKAARAYDLAAIKYWGSSTHLNFPLKNYELEIEEMKNMNRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGANAVTNFDTSRYDVERIIASSSLLSGEFARRKKEHKPTNSIEHKEPKQNVTQTDEGLEISNSLDWRAVFHDNLLLNPSASVESIDQKSMTSSGYMNHVIGVVETESSNQEIVNDSRKYKAHFSNASSVVSSLSSSRETSPDKSNGSSSVLFAKSPFGSNGSNWLPSPQMRLAPISLPVWNDA* 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1699930 1702537 + Chy7G130410.1 Chy07g00211 230222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00211 572 SUPERFAMILY DNA-binding domain 339 399 IPR016177 GO:0003677
Chy07g00211 572 MobiDBLite consensus disorder prediction 1 20 - -
Chy07g00211 572 ProSiteProfiles AP2/ERF domain profile. 340 398 IPR001471 GO:0003700|GO:0006355
Chy07g00211 572 Pfam AP2 domain 340 390 IPR001471 GO:0003700|GO:0006355
Chy07g00211 572 Pfam AP2 domain 238 296 IPR001471 GO:0003700|GO:0006355
Chy07g00211 572 SMART rav1_2 340 404 IPR001471 GO:0003700|GO:0006355
Chy07g00211 572 SMART rav1_2 238 310 IPR001471 GO:0003700|GO:0006355
Chy07g00211 572 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 12 540 - -
Chy07g00211 572 ProSiteProfiles AP2/ERF domain profile. 238 304 IPR001471 GO:0003700|GO:0006355
Chy07g00211 572 MobiDBLite consensus disorder prediction 520 541 - -
Chy07g00211 572 Gene3D AP2/ERF domain 340 400 IPR036955 GO:0003700|GO:0006355
Chy07g00211 572 Gene3D AP2/ERF domain 237 306 IPR036955 GO:0003700|GO:0006355
Chy07g00211 572 MobiDBLite consensus disorder prediction 418 445 - -
Chy07g00211 572 PRINTS Ethylene responsive element binding protein signature 239 250 IPR001471 GO:0003700|GO:0006355
Chy07g00211 572 PRINTS Ethylene responsive element binding protein signature 380 400 IPR001471 GO:0003700|GO:0006355
Chy07g00211 572 Coils Coil 305 325 - -
Chy07g00211 572 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12 540 - -
Chy07g00211 572 MobiDBLite consensus disorder prediction 418 441 - -
Chy07g00211 572 CDD AP2 339 400 IPR001471 GO:0003700|GO:0006355
Chy07g00211 572 CDD AP2 237 304 IPR001471 GO:0003700|GO:0006355
Chy07g00211 572 SUPERFAMILY DNA-binding domain 237 305 IPR016177 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00696 Chy-Chr4:8352238 Chy07g00211 Chy-Chr7:1699930 1.10E-129 dispersed
Chy05g00712 Chy-Chr5:9314823 Chy07g00211 Chy-Chr7:1699930 3.76E-115 dispersed
Chy06g01597 Chy-Chr6:18383126 Chy07g00211 Chy-Chr7:1699930 2.79E-109 dispersed
Chy07g00211 Chy-Chr7:1699930 Chy03g00967 Chy-Chr3:13208870 1.95E-08 dispersed
Chy02g00817 Chy-Chr2:5154355 Chy07g00211 Chy-Chr7:1699930 4.09E-170 wgd
Chy03g01615 Chy-Chr3:18090114 Chy07g00211 Chy-Chr7:1699930 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18269 PF00847 AP2 1.30E-11 CL0081 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00211 K09285 - csv:101212143 1088.17