Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00230 ATGGGAATCTGTATATCCTCTGCATCTTCTCAGATTCGCCATGAAACTAACAAAGTTGGAAGTATTATTATTGAAGAAGATCATTATAAGTCATGTTATTCTGTTTGCGGGATTCAGAAACTTGAATCCATTTGTTCTAAGCAAGGCAGCAAAGGAATCAATCAAGATGCTGCTTTTGCATATCAGGAGTATGGAGAAGTTGAAGAGAGTGATTTGTTTGGAGTTTTTGATGGGCATGGACCAAATGGTCATATTGTGAGCAATTTAGTGAAGAATAGATTGCCTTCATTATTGCTTGGGGAGGTAACTGCTAAGTCAAGTTTGGTGAAGAGGAAGAGTTTCAATGCATGGAAAGAAGCTTTTGAAACTTCCTTCAAGGTTATGGATAAAGAGATCAAACTCCAAGAGAATTTGGATGGCTCTTGCAGTGGATCAACCGCTGTTGTTATCGTCAAACAGGGAGACTATTTGGTGATTGGGAATCTGGGGGATTCAAGGGCGGTGATGGGGAGGATGAGGGAGGATGGAGGAGTCAAAGCTGTTCAATTAACTACAGATTTAAAGCCTGGATTGGCGAGTGAGGGTGAGCGAATAAGAAGATGTAAAGGGAGAGTCTTGGCGCTGAAAGACGAGGCTCATATACAAAGAGTGTGGCTCCCTAACGAAGACTCACCGGGGCTGGCTATGTCAAGAGCTTTTGGTGATTTTGCTCTCAAAGATTATGGCATTATTAATCTCCCTGATGTCTCCTTCCGCCCTCTCACTTCTCTCGATCGCTTCATCGTTCTCGCCACTGATGGGGTAATCCTCTCTTCTCTTTTTTTTTTTCGATAG 834 42.45 MGICISSASSQIRHETNKVGSIIIEEDHYKSCYSVCGIQKLESICSKQGSKGINQDAAFAYQEYGEVEESDLFGVFDGHGPNGHIVSNLVKNRLPSLLLGEVTAKSSLVKRKSFNAWKEAFETSFKVMDKEIKLQENLDGSCSGSTAVVIVKQGDYLVIGNLGDSRAVMGRMREDGGVKAVQLTTDLKPGLASEGERIRRCKGRVLALKDEAHIQRVWLPNEDSPGLAMSRAFGDFALKDYGIINLPDVSFRPLTSLDRFIVLATDGVILSSLFFFR* 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1872076 1873104 - Chy7G130600.1 Chy07g00230 230241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00230 277 Gene3D - 39 270 IPR036457 -
Chy07g00230 277 SMART PP2C_4 25 270 IPR001932 -
Chy07g00230 277 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Chy07g00230 277 SUPERFAMILY PP2C-like 42 268 IPR036457 -
Chy07g00230 277 Pfam Protein phosphatase 2C 48 268 IPR001932 -
Chy07g00230 277 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 1 272 - -
Chy07g00230 277 CDD PP2Cc 43 268 IPR001932 -
Chy07g00230 277 ProSiteProfiles PPM-type phosphatase domain profile. 41 277 IPR001932 -
Chy07g00230 277 PANTHER ALPHABET, ISOFORM E-RELATED 1 272 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00230 Chy-Chr7:1872076 Chy11g01535 Chy-Chr11:21916084 1.96E-67 dispersed
Chy07g00230 Chy-Chr7:1872076 Chy05g01064 Chy-Chr5:15162792 2.92E-74 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00230 - - csv:101214070 526.939