Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00239 ATGTCGAAAATGAAACATCTTCTTCGAAAGCTTCACATCGGTGGAGGACTTAACGAGCATCAGCGATTGAGCGATGCTCGACCTGTAACACGACCAAGTTCGAGCCCCAGTCCCGGCCCAAGCCCCAATAGTAATCCATCGGGTTCGTCGTCATCTGGGTCTTCTTCGTCTTTGTCTATGGCGTCTTCTACTACAATGGGGAGATTGGAAGCTGTTGAATCAGTCGTTGATCCGGCGGCTTCTGGGGATGTTGTGGGCGGTGGGTGCGTGGATTTCAATGCCTTGGAAGAGGAGTTTCAGGTGCAATTGGCTATGGCGATTAGTGCTTCCGATCCTGATTCTAGACAAGATACGGAATCAGCTCAGATCGATGCTGCCAAGCGGATGAGTCTTGGCTGTTCGCCTTCAGTCTCCGGCAGTAAAGCCCTCGCTGAATTTCTCTCGCTTCAGTATTGGAGCTATAATGTTGTAAATTATGACGAGAAAGTGATGGATGGATTTTATGACTTATACGGCATTACTGCAAATTCTAGCACCCGTGGAAAGATGCCACTGTTAGTTGATCTTAAAGAAATATGTGTGACGAGTGATATTGATTATGAGGTGATTTTGGTAAACCGCTTGCTTGATCCTGAACTTCAACAGCTGGAGAGACAAGTATATAACATATTCATGGAATGCAGAGTTTCTGAATATGGCTTCATTTTAAGTGGCCTGGTTCAAAAAATTGCTGATATGGTTGTTGCTAGAATGGGTGGCCCTGTTGGTGATGCTGAAGAAATGTTGAGAAGGTGGACACGCAGGAGTTATGAAATGCGTAGTTCTCTGAACACTATTATTCTACCACTTGGTCGTCTTGATATTGGACTTGCACGTCATAGAGCCTTGCTTTTTAAGGTGCTAGCTGATAGGATTAATCTTCCATGCATACTTGTCAAAGGAAGCTACTACACTGGTACTGATGACGGAGCTGTGAACATGATCAAAATTGATAATGGAAGTGAATATATAATTGATCTTATGGGTGCTCCAGGCACGTTAATTCCCTCAGAGGCACCCAGCGGTCAATTTTCGAATTATGGATTTGATAGAAGGCCAGCAGATGTTATAGAAGTTCCTGAAGATACTCCAATATTACAAAATGAAGGAGCTGAAGCAGTGTCAATTTCATCTACTCAAGATGAAGTAGCAGATGTTTGCAACTTAATATCCAAAGAAGCTTCAGATTTAGATGCTCAATCAAAAGAAAACATTAGGAACTTTATTGAAGAAATTCAAAGTGGGAGTTCTGGATATGATTTTGCAAAGCTTCTAGAATCAGAAAGCAGTGCATGTGAAGGTTCATTGGGTGCATTTGCACAGTCCGCTTCTGCACAAAAGAAGAAAGTGAAAAAAGTGTCAAAGTATGTCATAAGTGCTGCAAAGAACCCAGAGTTTGCTCAAAAATTACATGCTGTCTTGTTAGAGAGTGGTGCATCACCTCCTGCCGATTTGTTTTCAGATATAGAATCACAGGACAACGGTGAAAGCAAAGAAACTTTTCAAATGTATCCAATCAATGGAAAAGGGATAGATGTTGGGCTTCAGAGCCACTCCTATATTTTAGCAAGCCATGGACAGTCTTCTGCTACTTCTACTGAAGCAGAGTACTTGAACAATATTGTCCAGGAAAATAAGCAGAAAGTGTCTTCTGGGGGATTGTCTGAAGAACAAATGGCCAATACAAATGCCAACAACCACAGCATTTTTTGGCCTCACAGTATGAAAAACGATGGATTTGTGTTTGTTGATGTTAATGGTGAAGCAGGAAAATTGGTTGATGTTAATGGAATTTTTCATCGTGAACATATGGATGGTGTTTTGTTGACATCTGATGCTGACTCTCATAAGAAACTAGGAAGTGCCTTAGTGAGTGAAGAAAGAAGATTCTTGCAAGATAAGAGCGGTGGAAATCTTCAATGCTTTGATTTGTGTGATAAGCCACTTGAAAATTTGTTACAAACTGATGATAGTAAACTGCATGCTAGTGATGAGCACAATGAGACAATTAACCCAATATTAGGTGAAGTTGCAGAATGGGAAATTCCTTGGGAGGATCTTCACATTGGTGAACGGATTGGTATTGGCTCATATGGCGAGGTTTATCGAGCAGATTGGAATGGCACTGAAGTTGCTGTGAAGAAGTTCTTGGATCAAGATTTTTCTGGTGCTGCTTTGGTTCAATTAAAATGTGAAGTTGAAATCATGTTAAGGCTGAGGCATCCTAATGTTGTCCTTTTCATGGGAGCTGTGACTCGCCCTCCTCATTTCTCTATCCTGACAGAGTTTCTTCCCAGGGGAAGTTTGTATAGGTTACTGCATCGGCCCAACTCTCAGCTAGATGAAAGGAGACGATTGAAAATGGCTCTTGATGTGGCCAAAGGAATGAACTACTTGCACACAAGTCATCCGACCATTGTTCATAGAGATCTAAAGTCCCCCAATCTCCTTGTTGATAAAAACTGGGTTGTCAAGGTCTGCGATTTTGGTTTGTCACGTGTGAAGCAGAATACATTTCTGTCTTCAAAATCAACTGCTGGAACGCCTGAATGGATGGCACCAGAAGTTCTAAGGAACGAACCAGCCAATGAAAAGTGTGATGTGTATAGTTTTGGTGTAATATTGTGGGAGTTGACGACATGCCGCATACCGTGGAAAGGTTTGAACCCAATGCAGGTCGTAGGAGCTGTTGGATTCCAGAATAGGCGCCTGGAAATCCCACAAGATGTTGATCCAGCAGTTGCACAGATCATTTGCGATTGTTGGCAAACGGACTCACAATTGAGGCCGTCGTTTTCTCAGCTTATTACTCGATTGCGGCGCCTGCAACGGCTTGTTCAGAAAACAGACTCCGGGAATCTAATATCGCAGTGA 2913 42.5 MSKMKHLLRKLHIGGGLNEHQRLSDARPVTRPSSSPSPGPSPNSNPSGSSSSGSSSSLSMASSTTMGRLEAVESVVDPAASGDVVGGGCVDFNALEEEFQVQLAMAISASDPDSRQDTESAQIDAAKRMSLGCSPSVSGSKALAEFLSLQYWSYNVVNYDEKVMDGFYDLYGITANSSTRGKMPLLVDLKEICVTSDIDYEVILVNRLLDPELQQLERQVYNIFMECRVSEYGFILSGLVQKIADMVVARMGGPVGDAEEMLRRWTRRSYEMRSSLNTIILPLGRLDIGLARHRALLFKVLADRINLPCILVKGSYYTGTDDGAVNMIKIDNGSEYIIDLMGAPGTLIPSEAPSGQFSNYGFDRRPADVIEVPEDTPILQNEGAEAVSISSTQDEVADVCNLISKEASDLDAQSKENIRNFIEEIQSGSSGYDFAKLLESESSACEGSLGAFAQSASAQKKKVKKVSKYVISAAKNPEFAQKLHAVLLESGASPPADLFSDIESQDNGESKETFQMYPINGKGIDVGLQSHSYILASHGQSSATSTEAEYLNNIVQENKQKVSSGGLSEEQMANTNANNHSIFWPHSMKNDGFVFVDVNGEAGKLVDVNGIFHREHMDGVLLTSDADSHKKLGSALVSEERRFLQDKSGGNLQCFDLCDKPLENLLQTDDSKLHASDEHNETINPILGEVAEWEIPWEDLHIGERIGIGSYGEVYRADWNGTEVAVKKFLDQDFSGAALVQLKCEVEIMLRLRHPNVVLFMGAVTRPPHFSILTEFLPRGSLYRLLHRPNSQLDERRRLKMALDVAKGMNYLHTSHPTIVHRDLKSPNLLVDKNWVVKVCDFGLSRVKQNTFLSSKSTAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELTTCRIPWKGLNPMQVVGAVGFQNRRLEIPQDVDPAVAQIICDCWQTDSQLRPSFSQLITRLRRLQRLVQKTDSGNLISQ* 971
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1908825 1917538 - Chy7G130690.1 Chy07g00239 230250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00239 970 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 83 963 - -
Chy07g00239 970 CDD STKc_MAP3K-like 706 952 - -
Chy07g00239 970 MobiDBLite consensus disorder prediction 11 64 - -
Chy07g00239 970 PRINTS Tyrosine kinase catalytic domain signature 813 831 IPR001245 GO:0004672|GO:0006468
Chy07g00239 970 PRINTS Tyrosine kinase catalytic domain signature 774 787 IPR001245 GO:0004672|GO:0006468
Chy07g00239 970 PRINTS Tyrosine kinase catalytic domain signature 879 901 IPR001245 GO:0004672|GO:0006468
Chy07g00239 970 PRINTS Tyrosine kinase catalytic domain signature 923 945 IPR001245 GO:0004672|GO:0006468
Chy07g00239 970 PRINTS Tyrosine kinase catalytic domain signature 860 870 IPR001245 GO:0004672|GO:0006468
Chy07g00239 970 MobiDBLite consensus disorder prediction 44 64 - -
Chy07g00239 970 Pfam Ethylene-responsive protein kinase Le-CTR1 144 348 - -
Chy07g00239 970 Gene3D Transferase(Phosphotransferase) domain 1 779 965 - -
Chy07g00239 970 Pfam Protein tyrosine and serine/threonine kinase 700 952 IPR001245 GO:0004672|GO:0006468
Chy07g00239 970 ProSiteProfiles Protein kinase domain profile. 700 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00239 970 ProSitePatterns Protein kinases ATP-binding region signature. 706 728 IPR017441 GO:0005524
Chy07g00239 970 Gene3D Phosphorylase Kinase; domain 1 693 777 - -
Chy07g00239 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 819 831 IPR008271 GO:0004672|GO:0006468
Chy07g00239 970 PANTHER SERINE-THREONINE PROTEIN KINASE 83 963 - -
Chy07g00239 970 SMART serkin_6 700 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00239 970 SUPERFAMILY Protein kinase-like (PK-like) 681 950 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01142 Chy-Chr2:8085783 Chy07g00239 Chy-Chr7:1908825 1.34E-70 dispersed
Chy07g00239 Chy-Chr7:1908825 Chy12g01404 Chy-Chr12:18151135 1.92E-81 dispersed
Chy07g00239 Chy-Chr7:1908825 Chy04g01970 Chy-Chr4:25583218 1.69E-32 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71361 PF07714 PK_Tyr_Ser-Thr 4.10E-65 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00239 K04424 - csv:101214554 1811.58