Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy07g00261 | ATGGAGGATCGGGAGGGGGAAGAGAAGGCAGAGGAAGAGGTGCAAGGTTCCAGCCTGACGATGGAGAAAGTGGCGGCGGCTAAGAAGTTTATAGAGAATCATTATAGAGCTCAGATGAAGAACATTCAAGAGCGGAAGGAGAGGCGATGGATGTTGGAAAGAAAGTTAGCCTCATCGGATGTGCCCAAGGAAGAACAAATCAATCTTATCAAAGATTTAGAACGGAAAGAAACTGAGTTTATGCGACTCAAAAGGCACAAGATTTGTGTTGATGATTTTGAGCTTTTAACCATCATTGGCAGGGGCGCTTTTGGTGAGGTTCGATTATGTCGTGAGAAGAAATCTGGTGATATATATGCTATGAAGAAGTTGAAAAAATCTGAAATGCTGATGAGGGGGCAGGTGGAACATGTTAGAGCAGAAAGGAATTTATTAGCTGAAGTTGCCAGCCACTGCATAGTGAAGCTTTATTACTCATTTCAGGATGCTGAATACTTGTATTTGATCATGGAATATCTTCCAGGTGGAGATATGATGACTCTTCTCATGAGAGAAGACACATTGACGGAAAATGTAGCTAAATTTTACATTGCACAAAGTGTTCTAGCAATAGAATCCATCCATAGGCACAACTATATTCACAGGGATATAAAACCCGACAATCTTCTTCTGGACAAAAATGGTCACATGAAACTTTCTGATTTTGGTCTCTGTAAGCCACTGGATTCTTTAACCCTATCAGCACTACATGAAAATAAAGCCATGGATGATGAAAATTTGGCAGAACCAATGGATATTGATGATAATAGGAGCAGTTGGAAGAGTCCCAGCGAACAGTTACACCATTGGCAAATGAACCGAAGGAAATTGGCATTTTCAACAGTGGGAACACCAGATTATATTGCTCCAGAAGTATTGCTTAAAAAAGGATATGGGATGGAGTGTGACTGGTGGTCCCTTGGTGCAATTATGTATGAAATGCTCGTAGGTTACCCTCCATTTTACTCCGATGATCCAATCACCACCTGCAGAAAGATTGTTCATTGGAAAAATCACTTGAAGTTTCCAGAAGATGCTAAGTTGACAATTGAAGCAAAGGATCTCATTTGTAGGTTGCTGTGCGATGTTGAGCATAGACTTGGTACTGGAGGAGCATACCAAATCAAAGCCCATCCATGGTTCAAAGATGTTGTCTGGGATAGGCTTTATGAAATGGAGGCAGCATTTAAGCCTGAGGTCAATGGAGAGCTCGATACTCAGAACTTTATGAAATTTGATGAATTGGATCCACCCATACCAGGAAAACGTGGCTCAGGACCGTCAAGGAAGATGCTATTGACTCCCAAAGATCTCAGCTTTGTTGGATATACATACAAGAACTTCGATGCTGTCAAAGGAGGGCTTCATGATGCTCAGAGATTATCAATGAAACAGGCTCCAATAGACGTATTAAATGGCACCGGGGGAGACTACACAACCGAACTAATAGGAAACGATGCCGAAATGCAAATGGTAGCAGTATCAGGAGACCCCATGTTGCCATAA | 1545 | 41.81 | MEDREGEEKAEEEVQGSSLTMEKVAAAKKFIENHYRAQMKNIQERKERRWMLERKLASSDVPKEEQINLIKDLERKETEFMRLKRHKICVDDFELLTIIGRGAFGEVRLCREKKSGDIYAMKKLKKSEMLMRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLMREDTLTENVAKFYIAQSVLAIESIHRHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDSLTLSALHENKAMDDENLAEPMDIDDNRSSWKSPSEQLHHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWKNHLKFPEDAKLTIEAKDLICRLLCDVEHRLGTGGAYQIKAHPWFKDVVWDRLYEMEAAFKPEVNGELDTQNFMKFDELDPPIPGKRGSGPSRKMLLTPKDLSFVGYTYKNFDAVKGGLHDAQRLSMKQAPIDVLNGTGGDYTTELIGNDAEMQMVAVSGDPMLP* | 515 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2059432 | 2064631 | + | Chy7G130910.1 | Chy07g00261 | 230272 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy07g00261 | 514 | Pfam | Protein kinase C terminal domain | 413 | 458 | IPR017892 | GO:0004674|GO:0005524|GO:0006468 | |
Chy07g00261 | 514 | CDD | STKc_NDR_like | 91 | 459 | - | - | |
Chy07g00261 | 514 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 395 | 468 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Chy07g00261 | 514 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Chy07g00261 | 514 | Gene3D | Transferase(Phosphotransferase) domain 1 | 293 | 414 | - | - | |
Chy07g00261 | 514 | Gene3D | Transferase(Phosphotransferase) domain 1 | 177 | 243 | - | - | |
Chy07g00261 | 514 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 212 | 224 | IPR008271 | GO:0004672|GO:0006468 | |
Chy07g00261 | 514 | Gene3D | Phosphorylase Kinase; domain 1 | 56 | 176 | - | - | |
Chy07g00261 | 514 | ProSiteProfiles | Protein kinase domain profile. | 93 | 394 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy07g00261 | 514 | ProSitePatterns | Protein kinases ATP-binding region signature. | 99 | 122 | IPR017441 | GO:0005524 | |
Chy07g00261 | 514 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 13 | 508 | - | - | |
Chy07g00261 | 514 | SMART | serkin_6 | 93 | 394 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy07g00261 | 514 | PANTHER | AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN | 13 | 508 | - | - | |
Chy07g00261 | 514 | SMART | pkinase_C_6 | 395 | 460 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Chy07g00261 | 514 | SUPERFAMILY | Protein kinase-like (PK-like) | 77 | 432 | IPR011009 | - | |
Chy07g00261 | 514 | Pfam | Protein kinase domain | 94 | 243 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy07g00261 | 514 | Pfam | Protein kinase domain | 285 | 394 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy05g00316 | Chy-Chr5:3138712 | Chy07g00261 | Chy-Chr7:2059432 | 0 | dispersed | |
Chy07g00261 | Chy-Chr7:2059432 | Chy11g01288 | Chy-Chr11:19049688 | 5.74E-47 | dispersed | |
Chy02g00061 | Chy-Chr2:447668 | Chy07g00261 | Chy-Chr7:2059432 | 0 | transposed | |
Chy03g01545 | Chy-Chr3:17622656 | Chy07g00261 | Chy-Chr7:2059432 | 0 | transposed | |
Chy09g00965 | Chy-Chr9:12338370 | Chy07g00261 | Chy-Chr7:2059432 | 8.94E-77 | transposed | |
Chy12g01587 | Chy-Chr12:19391094 | Chy07g00261 | Chy-Chr7:2059432 | 1.73E-78 | transposed | |
Chy02g01246 | Chy-Chr2:9075709 | Chy07g00261 | Chy-Chr7:2059432 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71362 | PF00069 | Pkinase | 4.40E-43 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy07g00261 | K08790 | - | csv:101212228 | 1036.94 |