Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00261 ATGGAGGATCGGGAGGGGGAAGAGAAGGCAGAGGAAGAGGTGCAAGGTTCCAGCCTGACGATGGAGAAAGTGGCGGCGGCTAAGAAGTTTATAGAGAATCATTATAGAGCTCAGATGAAGAACATTCAAGAGCGGAAGGAGAGGCGATGGATGTTGGAAAGAAAGTTAGCCTCATCGGATGTGCCCAAGGAAGAACAAATCAATCTTATCAAAGATTTAGAACGGAAAGAAACTGAGTTTATGCGACTCAAAAGGCACAAGATTTGTGTTGATGATTTTGAGCTTTTAACCATCATTGGCAGGGGCGCTTTTGGTGAGGTTCGATTATGTCGTGAGAAGAAATCTGGTGATATATATGCTATGAAGAAGTTGAAAAAATCTGAAATGCTGATGAGGGGGCAGGTGGAACATGTTAGAGCAGAAAGGAATTTATTAGCTGAAGTTGCCAGCCACTGCATAGTGAAGCTTTATTACTCATTTCAGGATGCTGAATACTTGTATTTGATCATGGAATATCTTCCAGGTGGAGATATGATGACTCTTCTCATGAGAGAAGACACATTGACGGAAAATGTAGCTAAATTTTACATTGCACAAAGTGTTCTAGCAATAGAATCCATCCATAGGCACAACTATATTCACAGGGATATAAAACCCGACAATCTTCTTCTGGACAAAAATGGTCACATGAAACTTTCTGATTTTGGTCTCTGTAAGCCACTGGATTCTTTAACCCTATCAGCACTACATGAAAATAAAGCCATGGATGATGAAAATTTGGCAGAACCAATGGATATTGATGATAATAGGAGCAGTTGGAAGAGTCCCAGCGAACAGTTACACCATTGGCAAATGAACCGAAGGAAATTGGCATTTTCAACAGTGGGAACACCAGATTATATTGCTCCAGAAGTATTGCTTAAAAAAGGATATGGGATGGAGTGTGACTGGTGGTCCCTTGGTGCAATTATGTATGAAATGCTCGTAGGTTACCCTCCATTTTACTCCGATGATCCAATCACCACCTGCAGAAAGATTGTTCATTGGAAAAATCACTTGAAGTTTCCAGAAGATGCTAAGTTGACAATTGAAGCAAAGGATCTCATTTGTAGGTTGCTGTGCGATGTTGAGCATAGACTTGGTACTGGAGGAGCATACCAAATCAAAGCCCATCCATGGTTCAAAGATGTTGTCTGGGATAGGCTTTATGAAATGGAGGCAGCATTTAAGCCTGAGGTCAATGGAGAGCTCGATACTCAGAACTTTATGAAATTTGATGAATTGGATCCACCCATACCAGGAAAACGTGGCTCAGGACCGTCAAGGAAGATGCTATTGACTCCCAAAGATCTCAGCTTTGTTGGATATACATACAAGAACTTCGATGCTGTCAAAGGAGGGCTTCATGATGCTCAGAGATTATCAATGAAACAGGCTCCAATAGACGTATTAAATGGCACCGGGGGAGACTACACAACCGAACTAATAGGAAACGATGCCGAAATGCAAATGGTAGCAGTATCAGGAGACCCCATGTTGCCATAA 1545 41.81 MEDREGEEKAEEEVQGSSLTMEKVAAAKKFIENHYRAQMKNIQERKERRWMLERKLASSDVPKEEQINLIKDLERKETEFMRLKRHKICVDDFELLTIIGRGAFGEVRLCREKKSGDIYAMKKLKKSEMLMRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLMREDTLTENVAKFYIAQSVLAIESIHRHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDSLTLSALHENKAMDDENLAEPMDIDDNRSSWKSPSEQLHHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWKNHLKFPEDAKLTIEAKDLICRLLCDVEHRLGTGGAYQIKAHPWFKDVVWDRLYEMEAAFKPEVNGELDTQNFMKFDELDPPIPGKRGSGPSRKMLLTPKDLSFVGYTYKNFDAVKGGLHDAQRLSMKQAPIDVLNGTGGDYTTELIGNDAEMQMVAVSGDPMLP* 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2059432 2064631 + Chy7G130910.1 Chy07g00261 230272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00261 514 Pfam Protein kinase C terminal domain 413 458 IPR017892 GO:0004674|GO:0005524|GO:0006468
Chy07g00261 514 CDD STKc_NDR_like 91 459 - -
Chy07g00261 514 ProSiteProfiles AGC-kinase C-terminal domain profile. 395 468 IPR000961 GO:0004674|GO:0005524|GO:0006468
Chy07g00261 514 MobiDBLite consensus disorder prediction 1 20 - -
Chy07g00261 514 Gene3D Transferase(Phosphotransferase) domain 1 293 414 - -
Chy07g00261 514 Gene3D Transferase(Phosphotransferase) domain 1 177 243 - -
Chy07g00261 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Chy07g00261 514 Gene3D Phosphorylase Kinase; domain 1 56 176 - -
Chy07g00261 514 ProSiteProfiles Protein kinase domain profile. 93 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00261 514 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Chy07g00261 514 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 508 - -
Chy07g00261 514 SMART serkin_6 93 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00261 514 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 13 508 - -
Chy07g00261 514 SMART pkinase_C_6 395 460 IPR000961 GO:0004674|GO:0005524|GO:0006468
Chy07g00261 514 SUPERFAMILY Protein kinase-like (PK-like) 77 432 IPR011009 -
Chy07g00261 514 Pfam Protein kinase domain 94 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00261 514 Pfam Protein kinase domain 285 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00316 Chy-Chr5:3138712 Chy07g00261 Chy-Chr7:2059432 0 dispersed
Chy07g00261 Chy-Chr7:2059432 Chy11g01288 Chy-Chr11:19049688 5.74E-47 dispersed
Chy02g00061 Chy-Chr2:447668 Chy07g00261 Chy-Chr7:2059432 0 transposed
Chy03g01545 Chy-Chr3:17622656 Chy07g00261 Chy-Chr7:2059432 0 transposed
Chy09g00965 Chy-Chr9:12338370 Chy07g00261 Chy-Chr7:2059432 8.94E-77 transposed
Chy12g01587 Chy-Chr12:19391094 Chy07g00261 Chy-Chr7:2059432 1.73E-78 transposed
Chy02g01246 Chy-Chr2:9075709 Chy07g00261 Chy-Chr7:2059432 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71362 PF00069 Pkinase 4.40E-43 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00261 K08790 - csv:101212228 1036.94