Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00267 ATGGCCCAAAAACGCCTCATATCGGGGCTGAAGAATGGATCGGCTAGAAATGGGCCTGAGGTAGCACTGGCCCAATATTTGGAGAAGGAAAGAGGGTATCTGGTTTCGGAGGTGGTTTGTGATTCAGTTTTAGAACTGGCTAAGATGAGCCTGGATGCAGCTGAGGATGAATCAACCTCTGAAATTCATATTCCAGCAGAGATTGATTGGGATATGTTAGACAAATCCAAATTCTTTTTTCTGGGGGCTGCTTTATTTTCAGGTGTATCAACAGCCCTTTATCCTATTGTTGTTTTGAAAACTCGACTTCAGGTTTCATCTACCAAGGTATCATGCTTTAAAATGTCATATTCTATCATGCGTCATGAAGGCTTAAGAGGGTTTTACAGAGGGTTTGGAACCTCTCTAATGGGAACTATCCCAGCTCGGGCCTTTTACATGGGGGCTCTTGAAATTACCAAGAGTGGCGTTGGAAGTGCAACGATTAAGCTAGGCTTTTCAGACACCACAGCCATGGCTATAGCTAATGCTGCTGCAGGGTTGAGCTCAGCCATGGCTGCTCAATTGGTTTGGACTCCAATAGATGTTGTAAGCCAAAGACTAATGGTTCAGGGATGCAATATCAGTGCTAAAAACAACGTTTCTAATCTTAATTCTTGTGTCTATAGAAATGGTATCGACGCATTTAGAAAAATCATTTATGCTGATGGTTTGCGAGGATTATATAGGGGTTTTGGGATTTCTATATTGACATATGCTCCATCCAATGCAGTTTGGTGGACTTCTTACTCTGTGGCTCACAGACTCATTTGGAGTGGTCTGGGCTACTACACAAGTAAGAAGGATGAAGGTTGTATTAATGGTGGCTATGGGTTTAAAACAGATTCTAAGGCAACAGTGGCAGTTCAAGGGTTGAGTGCCGCCTTGGCTAGTGGAGTTTCTGCTATCATAACAATGCCCCTTGATACCATCAAGACTAGATTACAAGTTTTGGATGGAGAAGAAAATGGCCAAAGACGCCCTTTAACGGCATTGCAGACCATACGGAACTTGATGAAAGAAGGTGGGCTGAATGCTTGTTATAGAGGGCTTGGACCAAGGTGGGCTTCAATGGCCATGTCGGCAACCACCATGATCACAACCTACGAGTTTCTCAAACGGCTGTCTACTAAGAGCCAAGATTGTTTGAGCAGAGGATGA 1200 43.75 MAQKRLISGLKNGSARNGPEVALAQYLEKERGYLVSEVVCDSVLELAKMSLDAAEDESTSEIHIPAEIDWDMLDKSKFFFLGAALFSGVSTALYPIVVLKTRLQVSSTKVSCFKMSYSIMRHEGLRGFYRGFGTSLMGTIPARAFYMGALEITKSGVGSATIKLGFSDTTAMAIANAAAGLSSAMAAQLVWTPIDVVSQRLMVQGCNISAKNNVSNLNSCVYRNGIDAFRKIIYADGLRGLYRGFGISILTYAPSNAVWWTSYSVAHRLIWSGLGYYTSKKDEGCINGGYGFKTDSKATVAVQGLSAALASGVSAIITMPLDTIKTRLQVLDGEENGQRRPLTALQTIRNLMKEGGLNACYRGLGPRWASMAMSATTMITTYEFLKRLSTKSQDCLSRG* 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2105148 2107432 + Chy7G130970.1 Chy07g00267 230278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00267 399 Gene3D Mitochondrial carrier domain 76 396 IPR023395 -
Chy07g00267 399 ProSiteProfiles Solute carrier (Solcar) repeat profile. 298 388 IPR018108 -
Chy07g00267 399 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 49 395 - -
Chy07g00267 399 Pfam Mitochondrial carrier protein 174 270 IPR018108 -
Chy07g00267 399 Pfam Mitochondrial carrier protein 84 155 IPR018108 -
Chy07g00267 399 Pfam Mitochondrial carrier protein 299 392 IPR018108 -
Chy07g00267 399 ProSiteProfiles Solute carrier (Solcar) repeat profile. 74 156 IPR018108 -
Chy07g00267 399 PRINTS Mitochondrial carrier protein signature 129 147 IPR002067 GO:0055085
Chy07g00267 399 PRINTS Mitochondrial carrier protein signature 88 106 IPR002067 GO:0055085
Chy07g00267 399 PRINTS Mitochondrial carrier protein signature 180 202 IPR002067 GO:0055085
Chy07g00267 399 ProSiteProfiles Solute carrier (Solcar) repeat profile. 171 269 IPR018108 -
Chy07g00267 399 SUPERFAMILY Mitochondrial carrier 71 385 IPR023395 -
Chy07g00267 399 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 49 395 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00267 Chy-Chr7:2105148 Chy08g00665 Chy-Chr8:14538425 9.74E-49 dispersed
Chy06g00780 Chy-Chr6:5481718 Chy07g00267 Chy-Chr7:2105148 8.76E-71 transposed
Chy09g00188 Chy-Chr9:1629821 Chy07g00267 Chy-Chr7:2105148 2.24E-81 transposed
Chy01g02185 Chy-Chr1:26400850 Chy07g00267 Chy-Chr7:2105148 5.18E-173 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00267 K15121 - csv:101213436 659.833