Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00274 ATGGATGTGAACGGCAATAAACCGAAAGTCGTTCGAAGAAGTTCGTCTCAGAAGGAAGGTGAAAATGCAGGCCAAGTTGTGGTTGAAATTAGCAATAGCAGCGTTGTGTTTTCGAAAGAAACCAGAGATGGAAATAACTACTGTGTACTGAACCAAGACAGAGTCGATTCACAGAACAAAGAGTCGACTGGTTCGAGCATTGACCATGGCTACGATTCACATATTCCTCCCACTGCTAATGAGCCCTTGAAAATTCCCAGTTCAAATAGAACCCTCACGCCCAGAAGATCTCTCAAAAGATCAATTCTATCGAGACCCAAATCCAGATTTGGGGAACAGTCACGTTATACCAATTCAGATGATATGTTTGAGGAGAAACATGAGTCGTTGAGAGAACAAATCGGTTCAACTTCATCCAGAAGCTCTTCTCTTAACACGCCGAAGGCCCAACCTGAGGAAGAAGATGAAGAGGATATAGTTAAGACAGAGCAGTTGAACAAAAAGCACAAGAAATGGAAGGTGAAGACAATGATTAAGTGGATTGTAGTTTTTTGCCTAATTGGGTGCTTGGTGGCTAGTTTGACCGTTAACCGTTTGAAGAATTGCTTCTTTTTGGGTTTGGAGGTTTGGAAATGGTGTTTACTTGCTACTGTGATTTTTTGTGGATTGATATTTACTCATTGGGCTATGAATGTGGTTGTCAGTTTGATTGAGGGAAACTTTTTGCTAAAGAAAAAAGTGCTCTATTTTGTTCATGGGTTGAAGAAGAGTGTCCAAGTGACCCTTTGGTTGGCATCGGTTCTTAGCACATGGGAGCCGTTGTTCAATCAGCGTAACCATAGGAGTTCAAGAACCACTGGGAGAATTCTGGATGCTATTACATGGACTCTTGTTGCTCTTCTTATAGGGTCATTCCTATGGTTGGTAAAAACATTATTGTTGAAAATACTGGCATCCAAGTTCCATAAGGATCGATTTTTCGACAGAATTCAGGAATCGATTTTCCATCATCATGTTCTACAAGCCCTCTTGGGGTCTCCATTAATGCAGGAAACTGAAAGTGCTGCCAAGTTCAGCCGTTGTTTATGTAGTTGGGAGAGTAAAAAATCAGACCTTAAGAAGATAATTGACACGGGAAAGATTCACAAGCTGCAGCGAGAGAAAGTTTCAGCTTGGACAATGAAGGTGTTGGTTGAGGCAGTTACAAGTTCGGCGATGTCAATCTCACAAATACTTGATGAAAGCTACTATAATGTTGACGATGGCGAGATTGACCATGAAATGGAAATTGCCAGTGTCGTTGCCTCCAAGATCCTTAGAAATGTTGCTCTTCCTGGGAAAAAGTTCATACAGGAAGAGGATCTTCTGCAATTCATGGTCAAAGAAGAAATTGATCTTGTGTTACCACACTTCGAGGTAGATGAGACAAGGAGGATTGGCAAGAAAGCTCTCAAAAAATGGGTGGTGAAGGTTTTTCAAGAGAGAAAAACTCTAGCACATGCCTTGAAAGACACTAAAACTGCTGTGAAGCAATTGAATAATTTGGTAACAGCGGTTGTTATAATAGTAATGGCTGTTATTTGGCTTCTGTTGATGGAAATTGCTACATCCAAAGTACTCGTTTTCCTTCTATCTCAACTTGCAGTGGCAGCTTTCATGTTCGGAAACGCTTGCAAGACTACATTTGAAGCTCTAATCTTTGTGTTTGTTATGCATCCATTTGATGTCGGGGACCGTTGTGTTGTCGATGGCGTCCCGCTGTTGGTTGAAGAAATGAACATCTTGACGACAGTCTTCTTGAAACTAAACAACGAGAAGGTGTATTATCCCAACTCAGTCTTGGCAACAAAGCCCATCAGTAACTACTACAGAAGTCCAGACATGAGCGAGACCACCGAATTCTCGATCAGCTTCGCGACGCCACTAGAGAGGATTGGAGCCATGAAAGAAAAAATAAAGAGGTATTTGGAGAAAAATTCACAACACTGGCGTCCAAGTCATCTTATGGTGGTGAAAGAGATCGAAAACGTGAATGAGATAAAGATTGCTCTTTTTTCTACCCACACCATGAGTTATCAAGACTATGGTGAGAAGATCAAACGAAGATCCGAGCTGGTGATGGAGTTGAAGAGAATATTTGAAGAACTGAAGATCAACTACAATCTTCTGCCTCAAACAATTCATCTCTTTCCAGTTGAAGCACACTAA 2208 41.3 MDVNGNKPKVVRRSSSQKEGENAGQVVVEISNSSVVFSKETRDGNNYCVLNQDRVDSQNKESTGSSIDHGYDSHIPPTANEPLKIPSSNRTLTPRRSLKRSILSRPKSRFGEQSRYTNSDDMFEEKHESLREQIGSTSSRSSSLNTPKAQPEEEDEEDIVKTEQLNKKHKKWKVKTMIKWIVVFCLIGCLVASLTVNRLKNCFFLGLEVWKWCLLATVIFCGLIFTHWAMNVVVSLIEGNFLLKKKVLYFVHGLKKSVQVTLWLASVLSTWEPLFNQRNHRSSRTTGRILDAITWTLVALLIGSFLWLVKTLLLKILASKFHKDRFFDRIQESIFHHHVLQALLGSPLMQETESAAKFSRCLCSWESKKSDLKKIIDTGKIHKLQREKVSAWTMKVLVEAVTSSAMSISQILDESYYNVDDGEIDHEMEIASVVASKILRNVALPGKKFIQEEDLLQFMVKEEIDLVLPHFEVDETRRIGKKALKKWVVKVFQERKTLAHALKDTKTAVKQLNNLVTAVVIIVMAVIWLLLMEIATSKVLVFLLSQLAVAAFMFGNACKTTFEALIFVFVMHPFDVGDRCVVDGVPLLVEEMNILTTVFLKLNNEKVYYPNSVLATKPISNYYRSPDMSETTEFSISFATPLERIGAMKEKIKRYLEKNSQHWRPSHLMVVKEIENVNEIKIALFSTHTMSYQDYGEKIKRRSELVMELKRIFEELKINYNLLPQTIHLFPVEAH* 736
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2141528 2144464 + Chy7G131040.1 Chy07g00274 230285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00274 735 MobiDBLite consensus disorder prediction 82 98 - -
Chy07g00274 735 MobiDBLite consensus disorder prediction 1 25 - -
Chy07g00274 735 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 24 729 - -
Chy07g00274 735 MobiDBLite consensus disorder prediction 118 133 - -
Chy07g00274 735 Pfam Mechanosensitive ion channel 514 719 IPR006685 GO:0016020|GO:0055085
Chy07g00274 735 MobiDBLite consensus disorder prediction 134 148 - -
Chy07g00274 735 Gene3D - 573 622 IPR023408 -
Chy07g00274 735 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 24 729 IPR016688 -
Chy07g00274 735 SUPERFAMILY Sm-like ribonucleoproteins 562 622 IPR010920 -
Chy07g00274 735 PIRSF Memb_At2g17000 13 733 IPR016688 -
Chy07g00274 735 MobiDBLite consensus disorder prediction 41 158 - -
Chy07g00274 735 MobiDBLite consensus disorder prediction 41 69 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00274 Chy-Chr7:2141528 Chy07g00276 Chy-Chr7:2155922 0 dispersed
Chy07g00274 Chy-Chr7:2141528 Chy07g00275 Chy-Chr7:2150206 0 tandem
Chy02g01258 Chy-Chr2:9193429 Chy07g00274 Chy-Chr7:2141528 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00274 K22048 - csv:101216955 1374.38