Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00276 ATGATGGATGTGGACATCAGTAATCCTTCAAAAGTTGTTCCAAGAAGTTCGTCTCCAAAGGAGAGTGAAAATGGAGGTGAATTTGTCGTTGATCTTAGCGGAGTTGAAAATGGATACTCTGTTCAAGAGCAAAACAGAGTCAATTCACAGACCAACGGGCTGATTGATTCTAGTATTAGCTCTGGCAACGATTCACAACTTGCGAATAAGCCACAGAATATCTCAAGTTCAAATGGAAACCTCATACTAAGAAGAGCAATCCTTTCGAAAGCCAAATCCAGATTTGGAGTACAGCCAGTTTATACAGATTCAAACATGTGTGAGGAGGAGAATTATCCGTCAAGAGAGCAAATTGCAAAAACTTCATCTAGAAACTTTACTCACAACACGCAGAAGGCCACACCTGAGAAAAAAGATGAGAAGCACAAGAAAGTGAAGGTGAAGACAGTGATCAAGTGGATTGGAGTTTTTTGCATAATTAGTTGCTTAGTGGCTAGCTTGACTGTTAACCCTTTGAAGAATAGCTTCCTTTGGGGTTTGAAGGTCTGGAAATGGTTTTTACTTGCTACTGTGATTTTGTGTGGATTGTTATTTACTCGTTGGGTTATGAATGTGATTGTCTTTTTGATAGAGAAGAACTTTTTGTTTAAGAAAAAAGTACTTTATTTTGTTCATGGGTTGAAGAAGAGTGTCCAAGTTGCCCTTTGGTTGACGTTGGTTCTGGCTACATGGGAGTCACTGTTTGAACGGAGAAACCATATGGTTTCAAATTCGAGGATCAATGCTAAAGTTTTAGATTTTGTTACGTGGACTTTGGTAAGCCTTCTTATAGGGGCATTCCTGTGGTTGATTAAAACATTGTTGCTGAAAATACTGGCCTCGAAGTTCCATATGAACCGATTTTTCGACAGAATACAGGAATCTCTTTTCCATCATCATATTCTACAAACCCTCTTGATGGCTCGTACACAGGAGAATGAAAGTTATGCCGAGTTCAGGTGTTGTCGATTTTCTTTTGAGAGTAAAAGATCAGACTGTCAAAAAGCGATTAACATAGAAAAGATTCTCCAGCTGAAGCAAGAGAAGGTTTCGGCTTGGAAAATGAAGACATTGGTTGATGCAGTTACTAGTTTGGAGATGTCAATATCAAAAACACTCGATGAAAGCTACCGAAATGCTGCTGATGGTGAGATCACAGACGAGATGAAAGTTGCCAAACAAGCCGCTAAGAAGATCTTCAAAAATGTTGCTCCTGGAAAGAAGTTCATAGAGGAAAAGGATCTGAAATTCATGATCGATGAAGCAGAAGTTAATCTTCTGTGGCCACACTTTGAGGTAGATAAGACAAAGAAGATTGACATGAAAGACCTAACAAATTGGGTGGTGAAGGTTTATCAAGGGAGGAAAACTCTAGCACATGCCTTGAAAGACACTAAAACAGCAGTGAAGCAATTGAATAATTTAGTAGCAGCGCTTATTGTAGTAGTGACAGCTGTTATTTGGCTTCTGTTGATGGAAATTGCTACAACCAAAGTACTCGTCTTCCTTCTAACTCAGCTTGCAGTGGCAGCTTTCATGTTTGGAAACACTTGCAAGACTGCATTTGAAGCTCTAATCTTTGTGTTTGTGATGCATCCATTTGATGTCGGGGACCGATGTGTTGTCGATGGTGTCCAGCTGTTGGTTGAAGAAATGAATATCTTGACAACAGTCTTCTTGAAGCTCAACAATGAGAAGGTGTATTATCCCAACTCAGTTTTGGCAACAAAGCCCATCACTAACTACTACAGAAGTCCAGACATGGGTGACACCATCGAATTCTCAATCAGTTTCACAACGCCATTGGAGAAGATTAGGGTCATGAAAGAAAAAATAAAGAGGTATTTGGAGGATAATCCACAACACTGGTACCCAAATCATAGTGTGGTGGTGCAGGAGATTGAAAATGTAAATAAGATAAAGATCGCTCTTTATACGAACCACACCATGAACTTTCAAGATTGGACTGAGAAGAACCAACGAAGAACAGAGCTCGTGATGGAGTTAAAGAGAATTTTTGAAGAACTGAAGATCAACTACAATCTTCTGCCTCAAACAGTTCATCTCTTCCCAATTGAGGGGCACTGA 2127 39.68 MMDVDISNPSKVVPRSSSPKESENGGEFVVDLSGVENGYSVQEQNRVNSQTNGLIDSSISSGNDSQLANKPQNISSSNGNLILRRAILSKAKSRFGVQPVYTDSNMCEEENYPSREQIAKTSSRNFTHNTQKATPEKKDEKHKKVKVKTVIKWIGVFCIISCLVASLTVNPLKNSFLWGLKVWKWFLLATVILCGLLFTRWVMNVIVFLIEKNFLFKKKVLYFVHGLKKSVQVALWLTLVLATWESLFERRNHMVSNSRINAKVLDFVTWTLVSLLIGAFLWLIKTLLLKILASKFHMNRFFDRIQESLFHHHILQTLLMARTQENESYAEFRCCRFSFESKRSDCQKAINIEKILQLKQEKVSAWKMKTLVDAVTSLEMSISKTLDESYRNAADGEITDEMKVAKQAAKKIFKNVAPGKKFIEEKDLKFMIDEAEVNLLWPHFEVDKTKKIDMKDLTNWVVKVYQGRKTLAHALKDTKTAVKQLNNLVAALIVVVTAVIWLLLMEIATTKVLVFLLTQLAVAAFMFGNTCKTAFEALIFVFVMHPFDVGDRCVVDGVQLLVEEMNILTTVFLKLNNEKVYYPNSVLATKPITNYYRSPDMGDTIEFSISFTTPLEKIRVMKEKIKRYLEDNPQHWYPNHSVVVQEIENVNKIKIALYTNHTMNFQDWTEKNQRRTELVMELKRIFEELKINYNLLPQTVHLFPIEGH* 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2155922 2158776 + Chy7G131060.1 Chy07g00276 230287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00276 708 Pfam Mechanosensitive ion channel 487 692 IPR006685 GO:0016020|GO:0055085
Chy07g00276 708 SUPERFAMILY Sm-like ribonucleoproteins 535 595 IPR010920 -
Chy07g00276 708 PIRSF Memb_At2g17000 3 705 IPR016688 -
Chy07g00276 708 Gene3D - 546 595 IPR023408 -
Chy07g00276 708 MobiDBLite consensus disorder prediction 1 26 - -
Chy07g00276 708 MobiDBLite consensus disorder prediction 118 139 - -
Chy07g00276 708 MobiDBLite consensus disorder prediction 52 74 - -
Chy07g00276 708 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 86 702 IPR016688 -
Chy07g00276 708 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 10 86 702 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00274 Chy-Chr7:2141528 Chy07g00276 Chy-Chr7:2155922 0 dispersed
Chy07g00276 Chy-Chr7:2155922 Chy11g01095 Chy-Chr11:15977556 1.99E-148 dispersed
Chy07g00275 Chy-Chr7:2150206 Chy07g00276 Chy-Chr7:2155922 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00276 K22048 - csv:101217429 1268.45