Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00282 ATGAAATCTGTGAAGAGGGCAGCCATGGGACTTCTTGTTGAGCTTGTTATCCTGGCTTTTCTTTTCTGTGCTACCGTTGGTGTGGTGGACTCTGATGATGGAGCAACGTTGTTGGAGATAAAGAAATCGTTCAGGGATGTGGATAATGTTCTTTATGATTGGACAAGCTCACCTTTATCAGATTTCTGTGTATGGAGAGGTGTCACCTGTGACAATGTCACTCTCAATGTTCTCTCTCTTAATCTTTCAGGTCTCAATCTGGATGGAGAAATTTCTCCTTCAATCGGAAACCTCAAAAGCCTGCAAACTCTGGATTTGAGGGGGAATGGTCTTTCTGGGCAAATTCCAGACGAGATTGGTGACTGTTCTTCGTTAATAAATATGGATTTATCTTTTAATGAGATTTATGGAGACATTCCATTTTCGATTTCGAAGTTGAAGCAGCTGGAAATGCTTGTTCTGAAAAATAATAGACTGATTGGGCCGATCCCGTCGACCTTATCTCAGATTCCAAATTTGAAGGTCTTAGATTTGGCACAGAATAATCTTAGTGGGGATATACCAAGACTAATTTACTGGAATGAAGTGCTGCAATATCTGGGTTTGCGTGGTAACAATTTGGTGGGCACACTCTCTCCAGATATGTGCCAGCTGACTGGTTTATGGTATTTTGATGTGAGAAACAACAGTTTAACTGGTAGCATACCTCAAACAATAGGCAACTGCACAGCCTTCCAGGTCTTGGACCTGTCATACAATCATCTCAATGGGGAGATACCATTTAACATTGGTTTCCTTCAAGTAGCCACGTTGTCCTTACAGGGTAATCAGCTATCAGGTCCCATTCCACCTGTAATTGGTCTGATGCAGGCGCTTGCTGTGTTAGATTTGAGCTGCAACATGTTAACTGGTCCAATCCCCTCTATCTTAGGGAATCTGACTTATACTGAGAAGTTGTACCTGCATAGTAATAAGCTCACTGGACCCATTCCGGCAGAGCTCGGGAATATGACGAAGCTCCATTATCTGGAACTGAATGATAATCATCTTGCTGGGAATATTCCAGCTGAGCTCGGGAAACTCACCGATTTGTTTGATCTAAATGTGGCTAATAACAATCTCGGAGGGCCGATCCCTGACAATCTTAGCTCTTGCATAAATCTCAACAGCCTAAATGTGCATGGCAACAAGTTGAATGGAACTATTCCCCCGTCTTTCCAGAGGCTAGAGAGTATGACTTACTTGAATCTTTCCTCAAATGATCTACGAGGTCCTATACCAGTTGAGTTGTCTCGTATTGGCAATTTGGATACATTAGACATTTCAAATAACAAAATTAGTGGCACAATTTCTTCATCCTTCGGTGATCTGGAACATCTCCTGAAGCTAAATTTAAGTAGGAATCATTTAACGGGATTCATTCCAGCTGAATTTGGCAATTTAAGGAGTGTCATGGAAATAGATATTTCACACAACCAGCTCTCTGGGTTCATTCCTCAAGAACTGAGTCAACTTCAAAATCTTCTCTCCCTGAGACTTGAGAACAACAATTTATCTGGGGATCTGACGTCGCTGATTAGCTGCCTAAGTCTTACAGAATTAAACGTATCTTATAACAATCTAGCTGGTGACATTCCCACAAGCAACAACTTCTCCAGGTTTTCATCTGATAGTTTCCTTGGAAATATTGCCCTCTGTGGATATTGGAATAGCAACAACTACCCCTGTCATGAAGCTCATACGACAGAGCGAGTGACCATATCTAAAGCCGCTATCCTGGGAATTGCTCTTGGTGCCCTTGTAATCCTTTTAATGATCCTTCTAACAGTGTGTCGTCCGAACAACACAATACCTTTTCCAGATGGATCACTTGACAAACCAGTTACTTACTCAACTCCCAAGCTAGTGATCCTTCACATGAACATGGCCCTTCACGTTTATGAGGACATTATGAGGATGACTGAAAATTTGAACGAAAAGTACATTATTGGATATGGAGCTTCAAGCACAGTCTACAAATGTGTACTGAAGAATTGTAAACCTGTGGCTGTCAAAAAGCTTTACTCTCACCAGCCCCATAGCATGAAGGTGTTCGAGACCGAACTGGAAACTGTAGGTAGCATCAAACACAGAAATCTAGTCAGCCTCCAAGGATACTCCTTATCCCCCTCTGGGAATCTCCTCTTCTATGACTACATGGAAAATGGCAGTCTTTGGGATCATCTACATGGCTCTGGCTCGACTAAGAAGAAAAAGCTTGACTGGGACACTCGGCTCAATATCGCACATGGAGCAGCTCAGGGACTGTCATATCTACACCATGATTGTAGCCCTCGCATCATCCACAGGGATGTTAAGTCATCTAACATTCTATTGGACAAGGATTTTGAAGCCCATCTCACTGATTTTGGTATTGCCAAGAGTTTGTGCACCTCAAAGACATATACGTCCACTTATATCATGGGAACCATTGGATACATCGATCCAGAGTATGCTCGGACTTCCCGACTTACTGAAAAGTCTGATGTTTACAGCTTTGGCATTGTGTTGCTTGAATTGCTTACAGGAAGAAAAGCAGTGGACAATGAATCAAATCTCCACCAATTGATCTTATCAAAAACAGCCAACAATGCTGTTATGGAGACAGTTGATCCTGAAATAACTGCAACTTGCAAGGACCTCGGAGCTGTAAAGAAGGCATTTCAGCTAGCTCTCCTTTGCACAAAGAGGCAACCATCCGATCGACCAACAATGCATGAAGTAACACGCGTTATTGGAAGTCTTCTACCCTCTGCCACAACACCAAAGCAAATACCAACCATAACAACCATTCCCCCATCTGCAAAATCCTCTTGCTACAAGGATGAGTATGCAAATCTAAAGACACCGCATGTGCTGAACTGCCCAACCATGAGCACCTCAGACGCCCAGCTCTTCGCCAAGTTTGGAGAGGCTTAG 2958 42.77 MKSVKRAAMGLLVELVILAFLFCATVGVVDSDDGATLLEIKKSFRDVDNVLYDWTSSPLSDFCVWRGVTCDNVTLNVLSLNLSGLNLDGEISPSIGNLKSLQTLDLRGNGLSGQIPDEIGDCSSLINMDLSFNEIYGDIPFSISKLKQLEMLVLKNNRLIGPIPSTLSQIPNLKVLDLAQNNLSGDIPRLIYWNEVLQYLGLRGNNLVGTLSPDMCQLTGLWYFDVRNNSLTGSIPQTIGNCTAFQVLDLSYNHLNGEIPFNIGFLQVATLSLQGNQLSGPIPPVIGLMQALAVLDLSCNMLTGPIPSILGNLTYTEKLYLHSNKLTGPIPAELGNMTKLHYLELNDNHLAGNIPAELGKLTDLFDLNVANNNLGGPIPDNLSSCINLNSLNVHGNKLNGTIPPSFQRLESMTYLNLSSNDLRGPIPVELSRIGNLDTLDISNNKISGTISSSFGDLEHLLKLNLSRNHLTGFIPAEFGNLRSVMEIDISHNQLSGFIPQELSQLQNLLSLRLENNNLSGDLTSLISCLSLTELNVSYNNLAGDIPTSNNFSRFSSDSFLGNIALCGYWNSNNYPCHEAHTTERVTISKAAILGIALGALVILLMILLTVCRPNNTIPFPDGSLDKPVTYSTPKLVILHMNMALHVYEDIMRMTENLNEKYIIGYGASSTVYKCVLKNCKPVAVKKLYSHQPHSMKVFETELETVGSIKHRNLVSLQGYSLSPSGNLLFYDYMENGSLWDHLHGSGSTKKKKLDWDTRLNIAHGAAQGLSYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCTSKTYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGRKAVDNESNLHQLILSKTANNAVMETVDPEITATCKDLGAVKKAFQLALLCTKRQPSDRPTMHEVTRVIGSLLPSATTPKQIPTITTIPPSAKSSCYKDEYANLKTPHVLNCPTMSTSDAQLFAKFGEA* 986
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2289357 2296792 + Chy7G131120.1 Chy07g00282 230293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00282 985 Gene3D Ribonuclease Inhibitor 269 577 IPR032675 -
Chy07g00282 985 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 12 975 - -
Chy07g00282 985 SUPERFAMILY L domain-like 267 555 - -
Chy07g00282 985 Gene3D Ribonuclease Inhibitor 30 193 IPR032675 -
Chy07g00282 985 Pfam Leucine rich repeat 291 350 IPR001611 GO:0005515
Chy07g00282 985 Pfam Leucine rich repeat 435 494 IPR001611 GO:0005515
Chy07g00282 985 Pfam Leucine rich repeat 367 422 IPR001611 GO:0005515
Chy07g00282 985 Pfam Leucine rich repeat 148 207 IPR001611 GO:0005515
Chy07g00282 985 ProSiteProfiles Leucine-rich repeat profile. 172 194 IPR001611 GO:0005515
Chy07g00282 985 ProSiteProfiles Protein kinase domain profile. 657 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00282 985 SUPERFAMILY Protein kinase-like (PK-like) 635 923 IPR011009 -
Chy07g00282 985 ProSitePatterns Protein kinases ATP-binding region signature. 663 686 IPR017441 GO:0005524
Chy07g00282 985 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 12 975 - -
Chy07g00282 985 Gene3D Ribonuclease Inhibitor 194 268 IPR032675 -
Chy07g00282 985 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Chy07g00282 985 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672|GO:0006468
Chy07g00282 985 Gene3D Transferase(Phosphotransferase) domain 1 733 938 - -
Chy07g00282 985 CDD STKc_IRAK 663 928 - -
Chy07g00282 985 Pfam Protein kinase domain 659 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00282 985 SUPERFAMILY L domain-like 31 266 - -
Chy07g00282 985 SMART serkin_6 657 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00282 985 SMART LRR_typ_2 457 480 IPR003591 -
Chy07g00282 985 SMART LRR_typ_2 409 433 IPR003591 -
Chy07g00282 985 SMART LRR_typ_2 98 122 IPR003591 -
Chy07g00282 985 SMART LRR_typ_2 218 242 IPR003591 -
Chy07g00282 985 SMART LRR_typ_2 337 361 IPR003591 -
Chy07g00282 985 SMART LRR_typ_2 170 194 IPR003591 -
Chy07g00282 985 Gene3D Phosphorylase Kinase; domain 1 639 732 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00510 Chy-Chr4:4985680 Chy07g00282 Chy-Chr7:2289357 6.37E-26 dispersed
Chy07g00282 Chy-Chr7:2289357 Chy12g01139 Chy-Chr12:16342205 9.82E-89 dispersed
Chy11g00382 Chy-Chr11:3559845 Chy07g00282 Chy-Chr7:2289357 1.10E-31 dispersed
Chy07g00282 Chy-Chr7:2289357 Chy10g00198 Chy-Chr10:4964620 1.70E-19 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71365 PF00069 Pkinase 8.50E-46 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00282 K20718 - csv:101214398 1868.97