Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00300 ATGGTCTGCGAGATGGAGAATGGTGTTATTGAAGATATGGACATTGAAGCGGTTCCTTCTATGTGGCCTGAGGATGTTGGACCAGATGTTAGAAAGCAGTTCAACGTAGAAAGGCCAGGAGCAGATCAAGATATGTTGGAAGAAGTTAACATAATAGAGGAACCGACAATTGTTGATTTCAAGAGACTTATAGAGTTAACTAACTATACTGAGAAAGGTTCTTCACAACTACAATACCTTGCAAAACAGTGGGAGTATAAGCAAGCAAATGCAGTGCGCCTCCTTAAAGAAGAACTTGACATCCTAAGCAAGCAGAGGAAAGAAGTTGAGCTCAAGAAATTGAAAATATTAGAGGAACATCTTTTTGAGGAAGAAAGATATGCTGGTGATAAACGTCCTATTTCTATTTTGGAAGAATCTTGTGATATATGGCAAGATATTCCAAGGAGGAAAACTGATTTCGTCTTTCAAAGCAAGAGAGTCGAAATTGATGCAGAGTATGATACAGTGACATACTGGAAGCAACGAGCCATGGATCTGGAAAAATTATTGGAAGCAAGTCTACAGCGAGAGCAGATGCTTGCTGAGAAGCTTAAGGAAAACATAAAAAATATTGAAAAGCAGTCTTCACCAGTTGAGGAGTTGTCACAGATTCTTAAAAGAGCCGACAATTTTTTGCATTTTGTTCTGCAGAATGCACCTGTTGTTTTTGGTCATCAGGACAAAGAGTTGCGGTACCGATTTATCTACAATCATTTTCCAAGTTTGCAAGAAGAGGATATTATAGGAAGAACAGACGTCGAAATTTTCAGTGGTGCTGGCGTTAAGGAATCTCAAGATTTCAAGAAAGAAGTTCTGGAGAAAGGGTTGCCTGCAAAGAGGGAGATTCAGTTTGATACAGAATTATTTGGGCTGAAGACCTTTTTGATTTATGTCGAACCTGTCTTTAGCAAGGCTGGGGAGACAATTGGAATAAATTATATGGGAATGGACATAACTGATCAGGTTAAAAAACGAGAAAAGATGGCAAAGCTCCGTGAGGAGATTGCAGTGCAAAAGGCCAAGGAATCAGAGCTGAACAAAACAATTCATATCACGGAGGAGACAATGCGAGCAAAGCAAATGCTAGCAACCATGTCACATGAAATTAGATCTCCATTGTCTGGAGTGGTTAGTATGGCTGAGATTCTGTCCACCACGAAACTTGATCGGGAGCAACGACATCTGTTAGATGTTATGCTGTCTTCAGGAGACTTGGTGCTTCAACTTATAAACGATATCTTGGATCTTTCTAAGGTTGAATCAGGAGTAATGAAGTTGGAAGCTACAAAATTCCGTCCAAGAGAGGTTGTAAAACACGTTCTACAGACTGCCGCCGCATCATTGCGAAAATTCTTAGTTCTGGAGGGACGTATAGCAGATGATGTCCCTATAGAGGTCATTGGAGATGTTCTTAGGATACGGCAAATCCTCACCAACTTGATCAGCAACGCAATCAAGTTCACTCATCAAGGGAAGGTTGGAATTAACCTTTATGTGTTACCCTATCCACCCATTGGGACAGGAGAAGAATGCCACAAGAAATCAACGGCTGATAACTCAACAGTTACAATAAACTCTTTGCAAGATGGAACATGTCTTCTACCCTCTCAGAATGGCTTGTGTGGCCAAAAACACAGCGACAGAAATCATTTGGATTGTGATGGACCAGGAACCCCAAGCAAGAGTGAAACCACAATGAATGGAAACAGAGAAAACAAATCGTGTTCTTCCGAAACGACAGTATGGATACGCTGTGATGTGTATGACACAGGAATTGGAATACCGGAAAATGCGCTACCAACCCTTTTTAAGAGGTACATGCAAGCCAGTGCCGATCATGCTCGAAAGTATGGAGGGACTGGACTTGGGTTGGCAATATGCAAACAGCTGGTTGAATTGATGGGTGGTCATCTCACCGTTTCGAGCCGAGAGAACCATGGATCTACATTTACATTTGTATTGCCTTACAAGGTTTCAAGCACCTGCAGTCCTTCGGACGATTCAGACGAGATCTCGGATGACGAATCTACAAACGACGAAATGACTGAGGGCTTTTTCCAATTCCAACCCCATAGTTTCAGTACGCTATCATCTTCTAATGGATCCACAAGGATCCCAAACTCATTGTTGCATACAACTGGGTATCCCACCTCAACCAAACTCAATGGATTAACTGAAGGTGTTCCTTATCCTATTTCCTCAAACAACATCGATACCCGTTACGCCAATGCTGATGTTGTAACCTCAAGCAAATCACAATGTTCATCAAGTCATGTAAACCCAAATCTTGATAACCAAAACCAACCAGATACAAATGCTCGGTTGCAAAATGTCGGGGATGTGAATTCCCTGCCCAAATCAGAAACAACAAAGTTTGAAGATAGATTGGAAAAACAAAGTAATAAACTTCAAAAAACAGATCAAGGGAAAGAGAGATCCGAGGCAAGTAATCACTGCAGAAATAGCAGTAGTGGTCCTGAAGTAACGTTGGCATTGGAACCCAGAATTCTTCTTGTTGAGGATAACAAGACCAATATTATGGTGACGCAGTCCATGATGAAGAAGTTCGGCCAAAAAATTGACGTTGTAACTAATGGCATTGAAGCTGTTCGAGCAGTTCAACGACGTTCTTACGATCTCATTCTCATGGATGTATTCATGCCAGTTATGGATGGGCTTGAAGCTACAAGGTTAATTCGTTCTTTTGAGGAAACAGGCAGTTGGGAAGCAGCTGTAAATGCTGGAATATTCCACCACCCAACTACTACACCTTCTTGGACTCCTTCCTCTTCCACATCCTCCCGCAACAGGATGCCCATCATCGCTATGACGGCGAATTCAATGTCAGAAAGCGCAGAAGAGTGTTATGAAAACGGGATGGACTCGTTCGTATCAAAGCCAATCACCTTCCAGAAGTTGAAAGAATGTCTTGAACGATATTTACCACAACCACCTTTGTAA 3003 41.72 MVCEMENGVIEDMDIEAVPSMWPEDVGPDVRKQFNVERPGADQDMLEEVNIIEEPTIVDFKRLIELTNYTEKGSSQLQYLAKQWEYKQANAVRLLKEELDILSKQRKEVELKKLKILEEHLFEEERYAGDKRPISILEESCDIWQDIPRRKTDFVFQSKRVEIDAEYDTVTYWKQRAMDLEKLLEASLQREQMLAEKLKENIKNIEKQSSPVEELSQILKRADNFLHFVLQNAPVVFGHQDKELRYRFIYNHFPSLQEEDIIGRTDVEIFSGAGVKESQDFKKEVLEKGLPAKREIQFDTELFGLKTFLIYVEPVFSKAGETIGINYMGMDITDQVKKREKMAKLREEIAVQKAKESELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDREQRHLLDVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLRKFLVLEGRIADDVPIEVIGDVLRIRQILTNLISNAIKFTHQGKVGINLYVLPYPPIGTGEECHKKSTADNSTVTINSLQDGTCLLPSQNGLCGQKHSDRNHLDCDGPGTPSKSETTMNGNRENKSCSSETTVWIRCDVYDTGIGIPENALPTLFKRYMQASADHARKYGGTGLGLAICKQLVELMGGHLTVSSRENHGSTFTFVLPYKVSSTCSPSDDSDEISDDESTNDEMTEGFFQFQPHSFSTLSSSNGSTRIPNSLLHTTGYPTSTKLNGLTEGVPYPISSNNIDTRYANADVVTSSKSQCSSSHVNPNLDNQNQPDTNARLQNVGDVNSLPKSETTKFEDRLEKQSNKLQKTDQGKERSEASNHCRNSSSGPEVTLALEPRILLVEDNKTNIMVTQSMMKKFGQKIDVVTNGIEAVRAVQRRSYDLILMDVFMPVMDGLEATRLIRSFEETGSWEAAVNAGIFHHPTTTPSWTPSSSTSSRNRMPIIAMTANSMSESAEECYENGMDSFVSKPITFQKLKECLERYLPQPPL* 1001
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2468997 2476995 + Chy7G131300.1 Chy07g00300 230311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00300 1000 PRINTS Bacterial sensor protein C-terminal signature 597 611 IPR004358 GO:0016310|GO:0016772
Chy07g00300 1000 PRINTS Bacterial sensor protein C-terminal signature 632 650 IPR004358 GO:0016310|GO:0016772
Chy07g00300 1000 PRINTS Bacterial sensor protein C-terminal signature 656 669 IPR004358 GO:0016310|GO:0016772
Chy07g00300 1000 ProSiteProfiles Response regulatory domain profile. 849 995 IPR001789 GO:0000160
Chy07g00300 1000 Gene3D - 336 434 - -
Chy07g00300 1000 SUPERFAMILY CheY-like 848 996 IPR011006 -
Chy07g00300 1000 CDD REC_hyHK_CKI1_RcsC-like 850 991 - -
Chy07g00300 1000 Pfam His Kinase A (phospho-acceptor) domain 373 436 IPR003661 GO:0000155|GO:0007165
Chy07g00300 1000 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 670 IPR003594 -
Chy07g00300 1000 SMART HisKA_10 371 436 IPR003661 GO:0000155|GO:0007165
Chy07g00300 1000 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 5 996 - -
Chy07g00300 1000 Gene3D - 845 995 - -
Chy07g00300 1000 Coils Coil 181 208 - -
Chy07g00300 1000 MobiDBLite consensus disorder prediction 762 841 - -
Chy07g00300 1000 ProSiteProfiles Histidine kinase domain profile. 378 672 IPR005467 -
Chy07g00300 1000 CDD HisKA 370 432 IPR003661 GO:0000155|GO:0007165
Chy07g00300 1000 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 371 436 IPR036097 GO:0000155|GO:0007165
Chy07g00300 1000 Coils Coil 92 112 - -
Chy07g00300 1000 Coils Coil 342 362 - -
Chy07g00300 1000 Pfam Response regulator receiver domain 850 917 IPR001789 GO:0000160
Chy07g00300 1000 CDD HATPase_EvgS-ArcB-TorS-like 487 669 - -
Chy07g00300 1000 SMART HKATPase_4 482 672 IPR003594 -
Chy07g00300 1000 MobiDBLite consensus disorder prediction 762 800 - -
Chy07g00300 1000 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 5 996 - -
Chy07g00300 1000 SMART REC_2 848 991 IPR001789 GO:0000160
Chy07g00300 1000 MobiDBLite consensus disorder prediction 801 831 - -
Chy07g00300 1000 Gene3D PAS domain 205 335 - -
Chy07g00300 1000 MobiDBLite consensus disorder prediction 572 587 - -
Chy07g00300 1000 MobiDBLite consensus disorder prediction 566 587 - -
Chy07g00300 1000 Gene3D - 435 676 IPR036890 -
Chy07g00300 1000 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 425 672 IPR036890 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00300 Chy-Chr7:2468997 Chy10g00085 Chy-Chr10:2159657 2.07E-62 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18279 PF02518 HATPase_c 9.50E-28 CL0025 Chy TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00300 - - csv:101219807 1868.97