Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00309 ATGGCGGAAACGGCGTCGTATATCAACACATGCAAGTCGTTTTTAGTTTTTCTGGCTTTGTCTTTTCCGGCGACAACGCTGGCATTGTCCTTCGGATTTTACGACGCCACGTGTCCCGCCGCCGAGTTAATGGTTAGGAACACCGTCAGATCGGCTTCCTCCGTTGACCCCACCGTCCCCGGGAAACTCCTCCGGTTGCTATTCCATGACTGTTTTGTTGAGGGATGTGATGCTTCTGTATTGGTAGAAGGAAATGGAACGGAACGAAGCGATCCGGCAAACAAGTCGCTTGGAGGATTCGAAGTAATCGATTCAGCTAAGAGAACTTTAGAAATTTTTTGTCCCGGAACTGTTTCATGTGCCGATATTGTTGTTCTAGCCGCCAGAGATGCAGTTGAATTCACCGGTGGGCCCTCTGTTGAAGTCCCGACCGGCCGAAGAGACGGAAAGATATCGGCGGCGTCAAACGTCCGGCCAAACATCGCCGACACAAGCTTTTCAGTCAACCAGATGATGAATCTCTTCTCATCAAAAGGACTGTCGGTGGACGATCTCGTCATCCTCTCCGGTGCGCACACCATCGGAACCTCCCACTGCAGCGCCTTCAGCGACCGCTTCCGACGAAACCCAAACGGCCAACTGACCCTCATCGACGCCTCTCTAGACGGGGCCTACGCCGACGAGCTCATGCGGCGGTGCCCTGCAGGCGCCTCCACTTCCGCCACCGTCGAAAACGATCCGGCGACGGCGTCTGTCTTCGACAATCAGTATTACAGAAACATTTTGTCACATAAAGGGCTGTTGCAGTCGGATTCCGTTCTGATCAGCGACGGCCGGACTAGAGCTCGGGTGGAGAGCTTCGCGAATGATGAGATTGGGTTCTTTGAAAACTGGGCCCAGTCGTTCTTGAAACTTAGTAGCGTTGGAGTTAAGAGTGGGGATGAAGGGGAAATTAGGTTGTCTTGTTCTTCTGTTAATGCTTGA 984 52.64 MAETASYINTCKSFLVFLALSFPATTLALSFGFYDATCPAAELMVRNTVRSASSVDPTVPGKLLRLLFHDCFVEGCDASVLVEGNGTERSDPANKSLGGFEVIDSAKRTLEIFCPGTVSCADIVVLAARDAVEFTGGPSVEVPTGRRDGKISAASNVRPNIADTSFSVNQMMNLFSSKGLSVDDLVILSGAHTIGTSHCSAFSDRFRRNPNGQLTLIDASLDGAYADELMRRCPAGASTSATVENDPATASVFDNQYYRNILSHKGLLQSDSVLISDGRTRARVESFANDEIGFFENWAQSFLKLSSVGVKSGDEGEIRLSCSSVNA* 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2546214 2548704 - Chy7G131390.1 Chy07g00309 230320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00309 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Chy07g00309 327 Gene3D - 32 326 - -
Chy07g00309 327 Pfam Peroxidase 45 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy07g00309 327 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy07g00309 327 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy07g00309 327 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy07g00309 327 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy07g00309 327 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy07g00309 327 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy07g00309 327 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy07g00309 327 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy07g00309 327 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy07g00309 327 Gene3D Peroxidase, domain 2 162 305 - -
Chy07g00309 327 ProSiteProfiles Plant heme peroxidase family profile. 28 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy07g00309 327 CDD secretory_peroxidase 29 325 IPR033905 GO:0004601|GO:0042744
Chy07g00309 327 PANTHER PEROXIDASE 18-RELATED 22 326 - -
Chy07g00309 327 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy07g00309 327 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy07g00309 327 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy07g00309 327 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy07g00309 327 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy07g00309 327 SUPERFAMILY Heme-dependent peroxidases 29 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy07g00309 327 PANTHER PEROXIDASE 25-RELATED 22 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00309 Chy-Chr7:2546214 Chy06g00900 Chy-Chr6:6580789 1.98E-82 dispersed
Chy11g01292 Chy-Chr11:19096808 Chy07g00309 Chy-Chr7:2546214 1.03E-17 dispersed
Chy07g00309 Chy-Chr7:2546214 Chy07g01260 Chy-Chr7:17305002 3.11E-76 transposed
Chy07g00309 Chy-Chr7:2546214 Chy02g00611 Chy-Chr2:3712025 4.33E-76 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00309 K00430 K18328 csv:101211842 632.484