Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00318 ATGGCGGCGTTGCTTCAATCCTCAAGACTGGCGATCTACGGTTTGAAGGTCGTGAGCGAATCCAATACACCCGAGACCAGCTTTTTCAGCTTAGAGAGGTATTTGTTCATTTGTCTGTCTCCAACCCTTATTCAGGTTGCAACAGTTCCCGAAGATATCTTGAAAGTCAAACTAGAAGTTGAGTCTGAGATAGGTGGGGAGGATCAAACATGGAACCGTGCTGAAAGCAATCCGCAATCGCAATCTCAAAGCCGTTACTTTGAGCCAGACAATCGAGATTGGCGTGGTCGATCTGGGCAGGTTCCGGGCTCCACGGAGGAAGGATCTTGGGATGCAAGTAAGGATTTGTCTGGACAATCTGAGTCAAGGTTCCAAGACTCGAATAATAGAACTCAAGTTTCTGGTAACCAAGGGGTTGGTACACCTGCTCTTATCAAGGCTGAAGTTCCTTGGTCAGTTAGAAGAGGTACTATCTCAGAAAAGGAACGGGTTTTGAAGACAGTTAAAGGTATACTTAATAAATTGACTCCGGAAAAGTTTGATTTACTCAAAGGTCAACTGATTGACTCTGGAATTACATCTGCTGATATTTTGAAGGATGTCATATCACTTATATTTGAGAAGGCCGTGTTTGAGCCCACATTTTGCCCTATGTATGCACTTTTGTGCTCTGATCTTAACGAGAAGCTTCCTTCATTTGCATCTGACGTGCCTGGAGAGAAAGATATCACTTTTAAACGAGTTCTCTTAAATATTTGCCAAGAGGCATTTGAAGGTGCTGATAACCTTAGGGCAGAAATCAGGCAGATGACTAGTCCTGAGCAGGAAATGGAAAGAAGAGATAAAGAAAGAATGGTTAAGCTTCGAACTCTAGGAAACATTCGACTGATAGGTGAGCTTCTAAAACAGAAGATGGTGCCTGAAAAGATTGTTCACCATATTGTTCTGGAGCTTTTGGGGCCTGACCCTAAGACATGCCCTGCTGAGGAGAACGTTGAGGCTATTAGTCAGTTTTTTAACACGATAGGTAAGCAACTGGATGAGAGCCCAAAATCTCGGCGGGTCAATGATTTATACTTCAGCCGGTTGAAGGAGCTCACTGCAAACACCCAACTAGCACCTAGGTTGAGATTTATGGTCCGTGATGTTCTTGATTTACGGGCCAATAGCTGGGTTCCTAGACGTGAAGAGGTGAAAGCAAAAACCATCACTGAAATTCATACAGAGGCTGAAAAGAATCTAGGGCTTCGTCCAGGTTCAGTTGCAATGATGAGAAATGGCCGTAATGCCGAGGCACTTGGGGGATTAAGCCCTGGTGGTTTTCCTGTTGCCCGACCTGGCTTTGGAGGTATGATGCCTGGAATGCCTGGAGGGAGGAAAATGCCTGGTATGCCTGGATTTGAGTCAGACAATTGGGAAGTTCCTAGATCTCGATCAATGCCAAGGGGCGAGAGTGGAGGTCATACTCAGGCTTCTGCACGTGTCCAATCATCACTAATGGGCAAAACGCCTTCCATTAATTCAAAATATTTACCTCAGGGAAGTGGTGGTGTAATTACAGGGAAAACAAGTGCCTTCCTACAAGGTAGTGCTGCGGCATCTCCTGCCCGACCACCAAGTTCCATGCCTGTTGCTCTCAACCCTAAACCAGTTGCTCCAGTTGCACCTGTCGTATCTTCTCCTCAGAAGCCTGCCACTCCTGCTGCATCCAATGTAGCTGATCTTCAAAAGAAAACCGTTTCGCTGCTTGAGGAGTACTTCAGTGTACGGATTCTTGATGAAGCCCTACAGTGTGTAGAGGAGCTGAAATCCCCAGCTTATCATCCTGAGGTTGTTAAAAAATCCCTTACCATAGCACTTGAGAAGATTCCGCCACGTTTAGACCCAGTCGTTGAGCTTCTTGAGCACTTGCTTCGCAAGAATGTCTTGACTGCAAAGGATATATGTACTGGGTGCTATCTATACGGGTCACAGATGGATGATATTGGCATCGATCTGCCAAAAGCGCCAAACAATTTCGGTGAGATTCTCGGGAAGTTGATTTTGATCGGGGGTCTGGATTTCACAGTTGTGAAGGAGATTCTTGAGAAGCTGGAAGATGACTACTTCCAGAAATCCATATTTGATGGTGCTATGAAGACCCTCAAATCTAGTCCTTCTGGAGAAAGAGTTCTTGCAACTCAAAGCGTTGAGGTCCAGGCATGTGAAACTTTACTTGCGTGA 2223 45.48 MAALLQSSRLAIYGLKVVSESNTPETSFFSLERYLFICLSPTLIQVATVPEDILKVKLEVESEIGGEDQTWNRAESNPQSQSQSRYFEPDNRDWRGRSGQVPGSTEEGSWDASKDLSGQSESRFQDSNNRTQVSGNQGVGTPALIKAEVPWSVRRGTISEKERVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKDVISLIFEKAVFEPTFCPMYALLCSDLNEKLPSFASDVPGEKDITFKRVLLNICQEAFEGADNLRAEIRQMTSPEQEMERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVLELLGPDPKTCPAEENVEAISQFFNTIGKQLDESPKSRRVNDLYFSRLKELTANTQLAPRLRFMVRDVLDLRANSWVPRREEVKAKTITEIHTEAEKNLGLRPGSVAMMRNGRNAEALGGLSPGGFPVARPGFGGMMPGMPGGRKMPGMPGFESDNWEVPRSRSMPRGESGGHTQASARVQSSLMGKTPSINSKYLPQGSGGVITGKTSAFLQGSAAASPARPPSSMPVALNPKPVAPVAPVVSSPQKPATPAASNVADLQKKTVSLLEEYFSVRILDEALQCVEELKSPAYHPEVVKKSLTIALEKIPPRLDPVVELLEHLLRKNVLTAKDICTGCYLYGSQMDDIGIDLPKAPNNFGEILGKLILIGGLDFTVVKEILEKLEDDYFQKSIFDGAMKTLKSSPSGERVLATQSVEVQACETLLA* 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2604723 2609436 + Chy7G131480.1 Chy07g00318 230329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00318 740 Pfam MA3 domain 575 686 IPR003891 -
Chy07g00318 740 Pfam MIF4G domain 165 389 IPR003890 GO:0003723|GO:0005515
Chy07g00318 740 ProSiteProfiles MI domain profile. 574 696 IPR003891 -
Chy07g00318 740 SUPERFAMILY ARM repeat 570 726 IPR016024 -
Chy07g00318 740 MobiDBLite consensus disorder prediction 102 139 - -
Chy07g00318 740 Gene3D - 156 391 - -
Chy07g00318 740 SMART if4_15 165 390 IPR003890 GO:0003723|GO:0005515
Chy07g00318 740 MobiDBLite consensus disorder prediction 68 139 - -
Chy07g00318 740 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 44 739 - -
Chy07g00318 740 SMART ma3_7 575 687 IPR003891 -
Chy07g00318 740 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 44 739 IPR045208 GO:0003743
Chy07g00318 740 MobiDBLite consensus disorder prediction 69 87 - -
Chy07g00318 740 Gene3D - 570 733 - -
Chy07g00318 740 MobiDBLite consensus disorder prediction 476 495 - -
Chy07g00318 740 SUPERFAMILY ARM repeat 158 393 IPR016024 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00325 Chy-Chr6:2174487 Chy07g00318 Chy-Chr7:2604723 2.03E-07 dispersed
Chy07g00318 Chy-Chr7:2604723 Chy12g01209 Chy-Chr12:16821631 1.44E-08 dispersed
Chy02g02139 Chy-Chr2:25616123 Chy07g00318 Chy-Chr7:2604723 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00318 K03260 - csv:101211356 1265.75