Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00333 ATGGAGGAGAGGAATGTTCTGTTTGGTAAATATGAGATTGGGAGGTTGCTTGGGAAGGGGACTTTTGCTAAGGTTTATTATGGAAAAGAATTGGAGTCTGGTGAAAGTGTTGCGATTAAGGTTTTGAATAAGGATCAGGTTAAGAAGGAAGGGATGATGGAGCAGATCAAGCGTGAGATCTCCGTTATGCGTCTTGTTCGTCATCCGAACATCGTTGAGTTGAAGGAAGTAATGGCGACGAAGACGAAGATCTTCTTCGTTATGGATTATGTTCGTGGTGGTGAGCTTTTTGCTAAAGTCGCTAGAGGAAAACTCAAAGAAGACGTAGCTCGGAAGTATTTCCAGCAGTTAATCAGCGCAGTCGATTACTGTCATAGTCGTGGAGTCTCTCACCGCGATTTGAAGCCGGAGAATCTTTTGCTGGATGAGAACGAAGATCTCAAGATTTCCGACTTTGGACTCTCCGCTTTACCGGAACAGCTTCGGAACGACGGTCTTCTCCACACGCAGTGCGGTACTCCGGCCTACGTCGCACCGGAAGTACTAAGAAGAAAGGGATACGATGGAGCAAAAGCCGATATTTGGTCTTGTGGTGTGATTTTGTATGTTTTGTTAGCAGGATTCCTTCCATTTCAGGATGAGAACATCATGACTATGTATAAGAAGGTTTTCAAAGCCGAATTCGAATGTCCGCCATGGTTCTCGGCTGAATCGAAGCGTTTGATTTCAAAAATCCTCGTCGTAGATCCAGGTAGACGAATCACAATCGGAGCAATCACGCGAGTTCCTTGGTTCCGTAGAGATTTCTCAAGATCGCTCTCGTTCACGATGAAAGAAACAATCGCAGTGAAAACAGAGGATTCCGATTCCGAAAGTCCAAAACTATCGACGCCAAAATTCTTCAATGCGTTCGAATTAATATCGTCGATGTCGTCCGGATTCGATCTATCGAGTTTATTCGAGAACAAAAGGAAGACAGGATCCATGTTCACATCGAGATGCTCGGTATCAACAATCATGGAAAAGATCGAGACGGTGGCGAAGAAACTAAGCTTCAAGGTATCGGAAGCGAAAGATTTCAAGCTCCGACTACAAGGTCCATTGGAAGGGAGAAAAGGAAAGCTGTCTGTGACGGCGGAGGTGTTCGAAATAGCACCGGAAGTCGCCATAGTAGAATTCTCAAAGTCGTCCGGCGATACTCTGGAATATTCGAAGTTTTGTGAGGAAGACGTTCGGCCGGCTCTGAAGGACATCGTTTGGACGTGGCAAGGTGATTGTGTCCCTAACGCTGACGGACGTCACAGTCAATTTAACGGCGATGAATTTTTGTGA 1332 45.57 MEERNVLFGKYEIGRLLGKGTFAKVYYGKELESGESVAIKVLNKDQVKKEGMMEQIKREISVMRLVRHPNIVELKEVMATKTKIFFVMDYVRGGELFAKVARGKLKEDVARKYFQQLISAVDYCHSRGVSHRDLKPENLLLDENEDLKISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRRKGYDGAKADIWSCGVILYVLLAGFLPFQDENIMTMYKKVFKAEFECPPWFSAESKRLISKILVVDPGRRITIGAITRVPWFRRDFSRSLSFTMKETIAVKTEDSDSESPKLSTPKFFNAFELISSMSSGFDLSSLFENKRKTGSMFTSRCSVSTIMEKIETVAKKLSFKVSEAKDFKLRLQGPLEGRKGKLSVTAEVFEIAPEVAIVEFSKSSGDTLEYSKFCEEDVRPALKDIVWTWQGDCVPNADGRHSQFNGDEFL* 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2713983 2715314 - Chy7G131630.1 Chy07g00333 230344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00333 443 Gene3D Transferase(Phosphotransferase) domain 1 91 271 - -
Chy07g00333 443 PANTHER - 1 432 - -
Chy07g00333 443 Pfam NAF domain 298 355 IPR004041 GO:0007165
Chy07g00333 443 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Chy07g00333 443 ProSiteProfiles Protein kinase domain profile. 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00333 443 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 1 432 - -
Chy07g00333 443 ProSiteProfiles NAF domain profile. 296 321 IPR018451 GO:0007165
Chy07g00333 443 Gene3D Kinase associated domain 1, KA1 296 421 - -
Chy07g00333 443 Pfam Protein kinase domain 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00333 443 SMART serkin_6 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00333 443 CDD CIPK_C 302 416 - -
Chy07g00333 443 CDD STKc_SnRK3 10 264 - -
Chy07g00333 443 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Chy07g00333 443 SUPERFAMILY Protein kinase-like (PK-like) 7 294 IPR011009 -
Chy07g00333 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00333 Chy-Chr7:2713983 Chy11g01389 Chy-Chr11:20296741 5.58E-180 dispersed
Chy04g01342 Chy-Chr4:20031321 Chy07g00333 Chy-Chr7:2713983 0 transposed
Chy10g00190 Chy-Chr10:4740849 Chy07g00333 Chy-Chr7:2713983 1.14E-85 transposed
Chy11g00802 Chy-Chr11:11554453 Chy07g00333 Chy-Chr7:2713983 8.80E-41 transposed
Chy02g02108 Chy-Chr2:25413498 Chy07g00333 Chy-Chr7:2713983 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71367 PF00069 Pkinase 2.70E-74 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00333 - - csv:101213773 854.744