Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00343 ATGACGGTTGAGCCTAGACTCGATGACCCAGTTGACCAATTTCCCACTGGAATGCGTGTTCTTGCTGTTGACGATGATCCCACTTGTCTTTTGATCTTGGAGACTTTGCTTCGTCGATGCCAGTATCATGTCACTACAACTAATCAGGCTGTTATGGCACTCAAGTTGCTGAGAGAAAACAAGAACAAGTTTGATGTGGTTATCAGTGATGTCCACATGCCTGACATGGATGGATTTAAGCTGCTAGAGCTTGTTGGGCTGGAGATGGACCTGCCTGTCATTATGCTCTCTGCAAATGGTGATCCCAAACTTGTGATGAAAGGAATTACTCATGGAGCGTGTGATTACTTGTTGAAGCCTGTTCGCATTGAGGAGCTAAAGAACATTTGGCAGCATGTAATCAGGAGAAAGAAATTTGATCCAAAGGACCGAATGAATTCCGGCAATCAGGACAGGCCTGATTCTGAGAATGGTGAAGAATCAGCAGATCCAAATGGGAAATTTAATAAAAAAAGGAAGGACCAGAACTATAATGAAGATGATGACCAGGACTATGGGCAAGATAATGATGACTCATCAACCCAGAAGAAGCCTCGTGTTGTTTGGTCTGTGGAGCTACATAGGAAGTTTGTAAATGCAGTTAACCAGTTGGGCATAGACAAGGCAGTGCCTAAAAAGATTTTGGACTTGATGAATGTCGAAAAGCTCACACGAGAAAATGTAGCAAGCCATCTCCAGAAATACAGGCTTTATCTAAAGAGGATCAGCTGTGTGGCAAACCAGCAAGCTAATATGGTGACTGCATTGAGCAGCGCAGATCCTTCTTATTTGAGAATTGGTTCCCTTGGCGGAATTGGGAATTTCCACTCTTTGACTGGACCTCCACAGTTTCCAAACACTTCTTATAGATCTATCCCAACCACCGGGATGTTCGGTCGATTGAATAGTCCTGCTTGTATGGGTATGCATGGCCTTTCTTCACCGGGAACAGTCCAACTGGGTAATTTGAGCAATTCTAGCAATGATCAGTCTACATTTCAGCCAATCGTGCTTTCTGGAAACCGCAGTGGGAATATTTTCCGTGGAATGCCTGAGCCATCAGAACTTGATCGACTCCAACATGTTAAGCATGGGACCCACGTGGACAATCTCACTTCTGCTTTTGATGAACGAACAGTATTTCCTGCTTCCATTGGCCTCCCAAATGGAAACATGTCTTCCAGTACGCTAAGTAATCCTCTTTTAGGATTAACTAATGATCCCTCGATTCCAGAAGCCCAGCATCATGAAGTGAATGGTGGTAGAAAATTTGGAACTCAATCTTCTATTTCGGTAGTATCTTCAAATTCAGATAGCCCACGTCCTTCATTAGATAATGTTAGATGCACTGGTGACAATTGGTCAAACGCTGTTCATTCATCTAGGGTGCACTTGAATACAATTCCATCTGGCAACCTTTCTAATGTTGCTACTTCCTACCATGGGCAGTTGAGAGATAATACTACCAGTGCATTGCATATAGGAAATTGTCTTTCTGACATTTCTTCAATAACTTCATTATCTACTCAGTCCCATGAATCGAGAATAGATTCTCAACGTCAAGCAGCTACAACTAGCAACAGATTTGATCAATTGATCTCAAAGGTTCCTGTTCAGGATTGGAATGATCATAAAGAGGATGCCTATTACCACACAACTATGGCCTGTAGCTCATCCAATTCTTTGATTCCAGTGATTGGTGCTGCAGAGACTTTGTCCAAGCGTTTGGAAAATCCTAACGCAATCTTCTCCGGTAGCAAGGATTTTAATGTGACTGGTCAAGCAAACGTTCTTGATCATGCAATGGTGGAACATGATCAATTCAAGAAATCAACCATGGAGACATCACTCATGTTGAGACAAGGGTACCTGTATGATCATCAGCAAAAGATGCAATCCAGATTTTCATCAAGCAACTGTGGCTCCTTGGAAGACATAGCGTGTGCAATGATGAAACAGGAACAAGATGATGGAAAATTATTGGAAGGAGAGTTTGGATGTGATAATTATCCCATTGGAACATGCATGTGA 2070 42.51 MTVEPRLDDPVDQFPTGMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMALKLLRENKNKFDVVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKFDPKDRMNSGNQDRPDSENGEESADPNGKFNKKRKDQNYNEDDDQDYGQDNDDSSTQKKPRVVWSVELHRKFVNAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVTALSSADPSYLRIGSLGGIGNFHSLTGPPQFPNTSYRSIPTTGMFGRLNSPACMGMHGLSSPGTVQLGNLSNSSNDQSTFQPIVLSGNRSGNIFRGMPEPSELDRLQHVKHGTHVDNLTSAFDERTVFPASIGLPNGNMSSSTLSNPLLGLTNDPSIPEAQHHEVNGGRKFGTQSSISVVSSNSDSPRPSLDNVRCTGDNWSNAVHSSRVHLNTIPSGNLSNVATSYHGQLRDNTTSALHIGNCLSDISSITSLSTQSHESRIDSQRQAATTSNRFDQLISKVPVQDWNDHKEDAYYHTTMACSSSNSLIPVIGAAETLSKRLENPNAIFSGSKDFNVTGQANVLDHAMVEHDQFKKSTMETSLMLRQGYLYDHQQKMQSRFSSSNCGSLEDIACAMMKQEQDDGKLLEGEFGCDNYPIGTCM* 690
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2803571 2807681 - Chy7G131730.1 Chy07g00343 230354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00343 689 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR10 1 664 - -
Chy07g00343 689 Gene3D - 198 256 - -
Chy07g00343 689 Pfam Response regulator receiver domain 20 128 IPR001789 GO:0000160
Chy07g00343 689 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 194 253 IPR017930 -
Chy07g00343 689 MobiDBLite consensus disorder prediction 141 180 - -
Chy07g00343 689 Pfam Myb-like DNA-binding domain 199 249 IPR001005 -
Chy07g00343 689 CDD REC_typeB_ARR-like 20 134 - -
Chy07g00343 689 SUPERFAMILY CheY-like 16 142 IPR011006 -
Chy07g00343 689 SUPERFAMILY Homeodomain-like 194 254 IPR009057 -
Chy07g00343 689 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
Chy07g00343 689 Gene3D - 18 197 - -
Chy07g00343 689 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 197 250 IPR006447 GO:0003677
Chy07g00343 689 MobiDBLite consensus disorder prediction 141 196 - -
Chy07g00343 689 PIRSF RR_ARR_type-B 1 689 IPR017053 GO:0003677|GO:0003700|GO:0009736
Chy07g00343 689 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 664 IPR045279 GO:0009736
Chy07g00343 689 SMART REC_2 18 130 IPR001789 GO:0000160
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02217 Chy-Chr2:26278279 Chy07g00343 Chy-Chr7:2803571 8.39E-47 dispersed
Chy02g02219 Chy-Chr2:26286444 Chy07g00343 Chy-Chr7:2803571 3.56E-66 dispersed
Chy03g01687 Chy-Chr3:18548026 Chy07g00343 Chy-Chr7:2803571 1.83E-87 dispersed
Chy04g00056 Chy-Chr4:603158 Chy07g00343 Chy-Chr7:2803571 7.74E-13 dispersed
Chy05g01262 Chy-Chr5:16978136 Chy07g00343 Chy-Chr7:2803571 1.00E-136 dispersed
Chy06g00735 Chy-Chr6:5017383 Chy07g00343 Chy-Chr7:2803571 2.42E-109 dispersed
Chy07g00343 Chy-Chr7:2803571 Chy11g01546 Chy-Chr11:22011151 3.88E-110 dispersed
Chy11g00670 Chy-Chr11:8310539 Chy07g00343 Chy-Chr7:2803571 3.31E-18 dispersed
Chy12g00223 Chy-Chr12:2599006 Chy07g00343 Chy-Chr7:2803571 1.13E-26 dispersed
Chy02g02099 Chy-Chr2:25279827 Chy07g00343 Chy-Chr7:2803571 1.76E-169 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18282 PF00072 Response_reg 3.20E-23 CL0304 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00343 - K14491 csv:101215220 1341.25