Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy07g00366 | ATGGCATTTGAAAGATCAGATTTTGACGTTAGAGGGGGGGGTGTTGAAGCACCATTTCCTTTTGGTAGCCCTACCAGTGAAAACGAATTGGCTCTAGTGGAATATACTCCCAAAACTACGTCGTTTTCCCCTGGTCCTCCTTCTGAAGTTACCGGAACAATTGATGGCAAATTCGACTGTGGTTATCTTGTAACTGTGAAATTGGGATCTGAGGTTTTAAGAGGAGTTCTTTACCATCCAGATCAGCCACCTCCCTCGGATCTCCGACCTCTATCTACCAACGCCATTGTACCGTATACCGGTGGGAGATATCGACATTCGGGTCGACGGCACCGTCGGAGCCGGAGAAAGGGAGATCCGAATCATCCGAAACCGAATAGAAGTGGGTATAATTTCTTCTTTGCTGAGAAGCATTATAAGCTTAAATCTCTGTATCCAAACAGAGAGAGGGAGTTCACTAAGATGATTGGAGAGTCTTGGAATAATCTTAGCCCTGAAGAAAGGATGGTTTATCAGAACATTGGGTTGAAAGATAAGGAAAGATACAGGAGAGAGTTGAAGGAGTATAAGGAGAAAATGAGGCTGGGAACAGAAGTTGATGGAGCTAACTATTCAAAACATGGAGACTAG | 630 | 44.29 | MAFERSDFDVRGGGVEAPFPFGSPTSENELALVEYTPKTTSFSPGPPSEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPPSDLRPLSTNAIVPYTGGRYRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYRRELKEYKEKMRLGTEVDGANYSKHGD* | 210 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2961623 | 2964027 | - | Chy7G131960.1 | Chy07g00366 | 230377 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy07g00366 | 209 | MobiDBLite | consensus disorder prediction | 98 | 129 | - | - | |
Chy07g00366 | 209 | PANTHER | HIGH MOBILITY GROUP B PROTEIN 9 | 44 | 197 | - | - | |
Chy07g00366 | 209 | CDD | HMGB-UBF_HMG-box | 123 | 187 | - | - | |
Chy07g00366 | 209 | MobiDBLite | consensus disorder prediction | 104 | 120 | - | - | |
Chy07g00366 | 209 | ProSiteProfiles | HMG boxes A and B DNA-binding domains profile. | 123 | 190 | IPR009071 | - | |
Chy07g00366 | 209 | SMART | hmgende2 | 122 | 191 | IPR009071 | - | |
Chy07g00366 | 209 | Pfam | HMG (high mobility group) box | 123 | 190 | IPR009071 | - | |
Chy07g00366 | 209 | Coils | Coil | 179 | 199 | - | - | |
Chy07g00366 | 209 | Gene3D | High mobility group box domain | 107 | 200 | IPR036910 | - | |
Chy07g00366 | 209 | SUPERFAMILY | HMG-box | 120 | 193 | IPR036910 | - | |
Chy07g00366 | 209 | PANTHER | HIGH MOBILITY GROUP B PROTEIN 9 | 44 | 197 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy05g00556 | Chy-Chr5:6082640 | Chy07g00366 | Chy-Chr7:2961623 | 7.38E-43 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18286 | PF00505 | HMG_box | 7.90E-13 | CL0114 | Chy | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy07g00366 | - | - | csv:101219101 | 376.326 |