Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00366 ATGGCATTTGAAAGATCAGATTTTGACGTTAGAGGGGGGGGTGTTGAAGCACCATTTCCTTTTGGTAGCCCTACCAGTGAAAACGAATTGGCTCTAGTGGAATATACTCCCAAAACTACGTCGTTTTCCCCTGGTCCTCCTTCTGAAGTTACCGGAACAATTGATGGCAAATTCGACTGTGGTTATCTTGTAACTGTGAAATTGGGATCTGAGGTTTTAAGAGGAGTTCTTTACCATCCAGATCAGCCACCTCCCTCGGATCTCCGACCTCTATCTACCAACGCCATTGTACCGTATACCGGTGGGAGATATCGACATTCGGGTCGACGGCACCGTCGGAGCCGGAGAAAGGGAGATCCGAATCATCCGAAACCGAATAGAAGTGGGTATAATTTCTTCTTTGCTGAGAAGCATTATAAGCTTAAATCTCTGTATCCAAACAGAGAGAGGGAGTTCACTAAGATGATTGGAGAGTCTTGGAATAATCTTAGCCCTGAAGAAAGGATGGTTTATCAGAACATTGGGTTGAAAGATAAGGAAAGATACAGGAGAGAGTTGAAGGAGTATAAGGAGAAAATGAGGCTGGGAACAGAAGTTGATGGAGCTAACTATTCAAAACATGGAGACTAG 630 44.29 MAFERSDFDVRGGGVEAPFPFGSPTSENELALVEYTPKTTSFSPGPPSEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPPPSDLRPLSTNAIVPYTGGRYRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYRRELKEYKEKMRLGTEVDGANYSKHGD* 210
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 2961623 2964027 - Chy7G131960.1 Chy07g00366 230377
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00366 209 MobiDBLite consensus disorder prediction 98 129 - -
Chy07g00366 209 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 44 197 - -
Chy07g00366 209 CDD HMGB-UBF_HMG-box 123 187 - -
Chy07g00366 209 MobiDBLite consensus disorder prediction 104 120 - -
Chy07g00366 209 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 123 190 IPR009071 -
Chy07g00366 209 SMART hmgende2 122 191 IPR009071 -
Chy07g00366 209 Pfam HMG (high mobility group) box 123 190 IPR009071 -
Chy07g00366 209 Coils Coil 179 199 - -
Chy07g00366 209 Gene3D High mobility group box domain 107 200 IPR036910 -
Chy07g00366 209 SUPERFAMILY HMG-box 120 193 IPR036910 -
Chy07g00366 209 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 44 197 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00556 Chy-Chr5:6082640 Chy07g00366 Chy-Chr7:2961623 7.38E-43 dispersed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18286 PF00505 HMG_box 7.90E-13 CL0114 Chy TR
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00366 - - csv:101219101 376.326