Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00376 ATGGCGGAGTACGGCGGCGAGAATCTGGAAGTGGATCCAAGAAGCGGTTACTGTAAGTCCACAAAAATCTTCCACAGCAAACGCCGCCCAATCCCACTTCCCCCTAATCAATCCCTCGATGCCACGACGTTCATCTCTTCCCGCCCTCACAACGGCAAAATCGCCCTCATCGACGCCTCCACCGGCCACCACATAACCTACTCCGATCTCTGGAACGCCGTCCACTCCGTCGCCTCTTCCCTTTCCGATATGGGCATCAGAAAAGGCCACGTCATCCTCCTCCTTTCCCCAAACTCTATCCACTTCCCCATTATTTGCCTCGCCGTCATGTCCATCGGCGCCATCATCACCACCACAAATCCCCTCAATACTCCCCAAGAAATCTCCAAGCAAATATCCGATTCCAAACCGATTTTAGCCTTCACTACCCAAGCATTAATCCCGAAAATCGCCACTTCCAAATTACCAATCGTCGTAATCGATGGGCAAATTCCGAAATCCCAAGCGAAAATTGTGTCGACATTGAGCGAAATGATGAGGAAAAAACCAAGTGGGAGTCAAATTAAGGAACGCGTGGAGCAAAACGACACAGCGACTCTGCTTTATTCCTCTGGAACGACAGGCGCGAGCAAAGGCGTGGTGTCATCTCACAAGAATCTAATCGCCATGGTTCAAGTGGTTGTAACCAGGTTCAAATTAAGCGAAGGGGAAGGGACTTTTATCTGTACGGTCCCGATGTTTCATATTTACGGCCTTGTGGCGTTCGCTACGGGGCTGCTTTCCTCAGGATCGACTATCGTTGTTTTGTCGAAATTTGAGATTCATGAAATGTTATCGGCGATTGAGAAGTACAAGGCTACGTATTTGCCTCTCGTGCCGCCGATTTTGGTGGCGCTGGTGAACGCCGCCGAGCAAATAAAAGGAAAGTACGATTTGGGGTCGTTACACACGGCACTTTCCGGCGGAGCGCCGCTGGGGAAGGAGGTGATTGAGGGTTTTGTTGAGAAATTTCCGAATGTTGCGATTCTTCAGGGTTATGGATTGACGGAGTCCACCGGAATTGGGGCGTCTACTGATTCTTTGGAGGAGAGTCGTCGGTACGGCACGGCGGGGCTTCTGTCGCCGAGTACTGAAGGGATGATTGTTGACCCGGAAACCGGTGAGGCTCTTCCTGTGAACCGGACCGGAGAGCTTTGGCTTAGAGGCCCCACCGTCATGAAAGGGTATTTTGGTAATGTGGAGGCTACAAGTTCAACCCTTGATTCGGCGGGATGGTTGAGAACCGGTGATCTGTGTTATATTGATGAAGATGGTTTTATTTTTGTGGTTGATAGACTTAAGGAACTCATCAAATATAAGGGTTATCAGGTGCCACCGGCAGAATTAGAGGCCTTGTTGCTTACTCATCCTAATATCTCTGATGCTGCTGTGATACCATATCCAGATAAGGATGTTGGACAGTTTCCTATGGCTTATGTGGTAAGAAAGGCTGGAAGTCACATTTCGCACAACGACGTTATGCAATTTGTAGCAAAACAGGTGGCACCGTACAAGAGAATTCGACGGGTGGCGTTTGTGGATTCCATTCCCAAGAATCCGTCTGGTAAAATACTAAGAAAGGATCTTATAAAGCTCGCAACCTCCAAACTCTAA 1653 49.12 MAEYGGENLEVDPRSGYCKSTKIFHSKRRPIPLPPNQSLDATTFISSRPHNGKIALIDASTGHHITYSDLWNAVHSVASSLSDMGIRKGHVILLLSPNSIHFPIICLAVMSIGAIITTTNPLNTPQEISKQISDSKPILAFTTQALIPKIATSKLPIVVIDGQIPKSQAKIVSTLSEMMRKKPSGSQIKERVEQNDTATLLYSSGTTGASKGVVSSHKNLIAMVQVVVTRFKLSEGEGTFICTVPMFHIYGLVAFATGLLSSGSTIVVLSKFEIHEMLSAIEKYKATYLPLVPPILVALVNAAEQIKGKYDLGSLHTALSGGAPLGKEVIEGFVEKFPNVAILQGYGLTESTGIGASTDSLEESRRYGTAGLLSPSTEGMIVDPETGEALPVNRTGELWLRGPTVMKGYFGNVEATSSTLDSAGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVPPAELEALLLTHPNISDAAVIPYPDKDVGQFPMAYVVRKAGSHISHNDVMQFVAKQVAPYKRIRRVAFVDSIPKNPSGKILRKDLIKLATSKL* 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3036561 3039300 - Chy7G132060.1 Chy07g00376 230387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00376 550 Gene3D - 21 447 IPR042099 -
Chy07g00376 550 Pfam AMP-binding enzyme C-terminal domain 461 536 IPR025110 -
Chy07g00376 550 CDD 4CL 33 542 - -
Chy07g00376 550 SUPERFAMILY Acetyl-CoA synthetase-like 47 547 - -
Chy07g00376 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 549 - -
Chy07g00376 550 Gene3D - 448 549 IPR045851 -
Chy07g00376 550 Pfam AMP-binding enzyme 50 452 IPR000873 -
Chy07g00376 550 PANTHER 4-COUMARATE--COA LIGASE-LIKE 3-RELATED 11 549 - -
Chy07g00376 550 ProSitePatterns Putative AMP-binding domain signature. 200 211 IPR020845 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00794 Chy-Chr4:10206486 Chy07g00376 Chy-Chr7:3036561 4.06E-156 dispersed
Chy05g00626 Chy-Chr5:7680862 Chy07g00376 Chy-Chr7:3036561 7.61E-16 dispersed
Chy07g00376 Chy-Chr7:3036561 Chy12g01185 Chy-Chr12:16671727 4.31E-166 dispersed
Chy09g01213 Chy-Chr9:14259472 Chy07g00376 Chy-Chr7:3036561 1.11E-61 dispersed
Chy07g00376 Chy-Chr7:3036561 Chy07g00384 Chy-Chr7:3075933 1.80E-41 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00376 K10526 - csv:101221396 1063.91