Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00407 ATGGCTACGGGTATAGATTTTTCACCTCCCTTCACTCTACTGGAAGGCGGCGGATACAGTAAGGACAATGTATCACCCACAGACGACGAAAGTTCTGATAGCTTTAATAGTTTGAAACAGATGAGCAGTGGGAAGCCTCCCCGACACCTCTCAGTAATGCGACATAGTGTGAGCTCCTTAAAGCTCCTTGGCCAAGCTGATTTAAGCTTGGATGCTGAAACTCTTGGGAATAAGTCACCTGATGGAAAAGCAGGATTCTTACCTGTCTTTAGGTCAGGTAGCTGCTCAGAAAGGGGACCTAAACAGTACATGGAAGACGAGCACATATGCATCGATGATCTTGTTGAACATATCCATGTTTGTGAAAATTTCACTTCTCCTGGAGCTTTCTATGGTGTATTTGATGGCCATGGGGGTACAGACGCTGCTGCTTTTGTTAGAAAGAACATCCTCAGATTCATAGTCGAAGACTCCTGCTTCCCAATTAGCGTAGAGAAGGCAATTAAGAGTGCTTTTCTGAAAGCTGACTACGCATTTGCTGATGCCAGTTCTCTGGATATCTCCTCCGGCACAACCGCCCTAACTGCTTTCATTTTTGGAAGAATTATAGCATTCGATTACATATATTGTGTTTTGAGGCTACAACTAGTGGGAGTATGCACAAAGACCGTATGTATAGAAGCCAAACCAAATCACAATAGGGAAGTTATAACCCAAGTGGATCTCTTAAGGCGCGATAGAACAATGATTATTGCGAATGCTGGGGATTGTCGAGCTGTTCTGGGGAGAAGGGGAAAGGCCATTGAGGTGTCAAAGGATCACAAGCCCAACTGTGCATCTGAAAAGCTTAGAATTGAGAAGCTGGGTGGGGTGATCTATGATGGATACCTGAATGGGCAGTTATCTGTGGCACGTGCAATAGGAGATTGGCACATGAAAGGTGCTAAGGGTTCTGCTTGCCCTCTGAGTGCAGAGCCGGAGCTGCAGGAACTGAACTTGACGGAGGAAGACGAATTTCTAATAATGGGATGCGATGGGCTTTGGGATGTGATGAGCAGTCAGTATGCTGTTACAATGGCAAGGAAAGAGCTGATGCTACATAATGATCCAGAGAGGTGTTCAAGAGAGCTGGTACGGGAGGCTCTAAAGCGAAATACGTGCGATAATTTAACTGTTATTGTGGTCTGTTTTTCAGCTGACCCGCCCCCTCGGATAGAAATTCCTCCGACTCGAGTAAGGAGAAGCATATCATTAGAAGGGCTGAATTTGTTGAAAGGTGTACTGGACTGCAATTCTTGA 1299 45.42 MATGIDFSPPFTLLEGGGYSKDNVSPTDDESSDSFNSLKQMSSGKPPRHLSVMRHSVSSLKLLGQADLSLDAETLGNKSPDGKAGFLPVFRSGSCSERGPKQYMEDEHICIDDLVEHIHVCENFTSPGAFYGVFDGHGGTDAAAFVRKNILRFIVEDSCFPISVEKAIKSAFLKADYAFADASSLDISSGTTALTAFIFGRIIAFDYIYCVLRLQLVGVCTKTVCIEAKPNHNREVITQVDLLRRDRTMIIANAGDCRAVLGRRGKAIEVSKDHKPNCASEKLRIEKLGGVIYDGYLNGQLSVARAIGDWHMKGAKGSACPLSAEPELQELNLTEEDEFLIMGCDGLWDVMSSQYAVTMARKELMLHNDPERCSRELVREALKRNTCDNLTVIVVCFSADPPPRIEIPPTRVRRSISLEGLNLLKGVLDCNS* 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3226570 3229733 - Chy7G132370.1 Chy07g00407 230418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00407 432 Gene3D - 88 404 IPR036457 -
Chy07g00407 432 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 244 419 - -
Chy07g00407 432 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 203 - -
Chy07g00407 432 CDD PP2Cc 90 397 IPR001932 -
Chy07g00407 432 SUPERFAMILY PP2C-like 85 398 IPR036457 -
Chy07g00407 432 PANTHER PROTEIN PHOSPHATASE 2C 244 419 IPR015655 GO:0004722|GO:0006470
Chy07g00407 432 PANTHER PROTEIN PHOSPHATASE 2C 1 203 IPR015655 GO:0004722|GO:0006470
Chy07g00407 432 ProSiteProfiles PPM-type phosphatase domain profile. 91 397 IPR001932 -
Chy07g00407 432 MobiDBLite consensus disorder prediction 29 44 - -
Chy07g00407 432 SMART PP2C_4 81 395 IPR001932 -
Chy07g00407 432 Pfam Protein phosphatase 2C 238 389 IPR001932 -
Chy07g00407 432 Pfam Protein phosphatase 2C 92 201 IPR001932 -
Chy07g00407 432 MobiDBLite consensus disorder prediction 1 50 - -
Chy07g00407 432 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01245 Chy-Chr5:16855973 Chy07g00407 Chy-Chr7:3226570 2.06E-97 dispersed
Chy07g00319 Chy-Chr7:2609705 Chy07g00407 Chy-Chr7:3226570 5.75E-36 dispersed
Chy07g00407 Chy-Chr7:3226570 Chy11g01602 Chy-Chr11:22569796 2.41E-88 dispersed
Chy07g00407 Chy-Chr7:3226570 Chy01g01787 Chy-Chr1:23499833 1.33E-98 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00407 K14803 - csv:101205355 754.977