Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy07g00425 | ATGTCGGGATCTGAGACCGGAGTGATATCCAGCGGCGAACACTTCACCATCGGTCTTCAAAAGAATTCAGTACAGTCACAACCGCCAGTCATGCAGAGCATGCTTTTACCCTTCGGTGCAGATGGCGTCTATAAGCCTGTTGCCACGGCCTGTCCCACCTACCAATCCTCCAGCGTCGGAGTTGCTGGTAATGCTGGTGCCGATGGATCTGCTCGTGATGCTTTCGTTAATGTGAATTCGCAAAGCGAGCCTGTAAAGAGGAAGAGAGGGAGACCTCGAAAGTATGGGCCAGATGGCAGTATGGCAGTGGCTCCTGCAGTCCGCCCTGCCGCTGCAACTCAGTCCAGTGGAGGTTTTTCTCCTTCTCCGACGGCCGCCCCTCAGTCGGGAGGATCAGCTTCTCCAACTTCCTTGAAGAAAGCCAGAGGCAGACCCCCGGGCTCCTCCACCAAAAAACATCAGCTGGATACTTCGGAGTCAGCAGGAGTTGGATTTACCCCACATGTCATCACCGTAAAAGCTGGAGAGGATGTATCTTCGAAAATAATGTCATTTTCACAGAATGGTCCTAGAGCTGTTTGTATTCTTACAGCAAATGGAGCAATATCCAATGTGACCCTACGTCAGCCAGCCATGTCTGGTGGAACTGTGACTTACGAGGGGCGATTCGAGATTTTATCGTTATCTGGGTCCTATCTCCTCTCAGAGAATGGCGGCCAGCGGAGTCGAACTGGAGGGCTAAGTGTTTCATTATCTGGACCAGATGGTAGAGTATTAGGTGGTGGGGTGGCTGGTCTTCTAACGGCAGCATCTCCTGTACAGGTGGTCGTGGGGAGTTTCGTCACTGATGGGGGGCACAAGGAATTGAGACAAGTAAACCAAATTGAACAGCCCCCTGTTTCTGCACCCCATAAACTTGCTCCGATCCGTGCTGGAATGACGGGGGCCAGCAGCCCTCCATCGCGTGGGACTCTGAGTGAATCCTCAGGAGGGCCCGGGAGTCCATTTAATCAGAGTGCTGGAGCCTGCAACAATAACACCATACCTTGGAAGTGA | 1056 | 52.65 | MSGSETGVISSGEHFTIGLQKNSVQSQPPVMQSMLLPFGADGVYKPVATACPTYQSSSVGVAGNAGADGSARDAFVNVNSQSEPVKRKRGRPRKYGPDGSMAVAPAVRPAAATQSSGGFSPSPTAAPQSGGSASPTSLKKARGRPPGSSTKKHQLDTSESAGVGFTPHVITVKAGEDVSSKIMSFSQNGPRAVCILTANGAISNVTLRQPAMSGGTVTYEGRFEILSLSGSYLLSENGGQRSRTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFVTDGGHKELRQVNQIEQPPVSAPHKLAPIRAGMTGASSPPSRGTLSESSGGPGSPFNQSAGACNNNTIPWK* | 352 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3288150 | 3290694 | - | Chy7G132550.1 | Chy07g00425 | 230436 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy07g00425 | 351 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 167 | 281 | IPR005175 | - | |
Chy07g00425 | 351 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 165 | 288 | - | - | |
Chy07g00425 | 351 | MobiDBLite | consensus disorder prediction | 310 | 351 | - | - | |
Chy07g00425 | 351 | Gene3D | - | 167 | 297 | - | - | |
Chy07g00425 | 351 | MobiDBLite | consensus disorder prediction | 113 | 136 | - | - | |
Chy07g00425 | 351 | ProSiteProfiles | PPC domain profile profile. | 161 | 301 | IPR005175 | - | |
Chy07g00425 | 351 | CDD | DUF296 | 166 | 280 | IPR005175 | - | |
Chy07g00425 | 351 | SMART | AT_hook_2 | 139 | 151 | IPR017956 | GO:0003677 | |
Chy07g00425 | 351 | SMART | AT_hook_2 | 86 | 98 | IPR017956 | GO:0003677 | |
Chy07g00425 | 351 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 15 | 345 | IPR039605 | GO:0003680 | |
Chy07g00425 | 351 | MobiDBLite | consensus disorder prediction | 317 | 351 | - | - | |
Chy07g00425 | 351 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10-LIKE ISOFORM X1 | 15 | 345 | - | - | |
Chy07g00425 | 351 | MobiDBLite | consensus disorder prediction | 75 | 161 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy03g01005 | Chy-Chr3:13564868 | Chy07g00425 | Chy-Chr7:3288150 | 2.30E-121 | dispersed | |
Chy07g00425 | Chy-Chr7:3288150 | Chy11g01635 | Chy-Chr11:22872895 | 2.27E-66 | dispersed | |
Chy07g00425 | Chy-Chr7:3288150 | Chy06g02136 | Chy-Chr6:25703791 | 9.67E-71 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy07g00425 | - | - | csv:101207513 | 643.269 |