Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00425 ATGTCGGGATCTGAGACCGGAGTGATATCCAGCGGCGAACACTTCACCATCGGTCTTCAAAAGAATTCAGTACAGTCACAACCGCCAGTCATGCAGAGCATGCTTTTACCCTTCGGTGCAGATGGCGTCTATAAGCCTGTTGCCACGGCCTGTCCCACCTACCAATCCTCCAGCGTCGGAGTTGCTGGTAATGCTGGTGCCGATGGATCTGCTCGTGATGCTTTCGTTAATGTGAATTCGCAAAGCGAGCCTGTAAAGAGGAAGAGAGGGAGACCTCGAAAGTATGGGCCAGATGGCAGTATGGCAGTGGCTCCTGCAGTCCGCCCTGCCGCTGCAACTCAGTCCAGTGGAGGTTTTTCTCCTTCTCCGACGGCCGCCCCTCAGTCGGGAGGATCAGCTTCTCCAACTTCCTTGAAGAAAGCCAGAGGCAGACCCCCGGGCTCCTCCACCAAAAAACATCAGCTGGATACTTCGGAGTCAGCAGGAGTTGGATTTACCCCACATGTCATCACCGTAAAAGCTGGAGAGGATGTATCTTCGAAAATAATGTCATTTTCACAGAATGGTCCTAGAGCTGTTTGTATTCTTACAGCAAATGGAGCAATATCCAATGTGACCCTACGTCAGCCAGCCATGTCTGGTGGAACTGTGACTTACGAGGGGCGATTCGAGATTTTATCGTTATCTGGGTCCTATCTCCTCTCAGAGAATGGCGGCCAGCGGAGTCGAACTGGAGGGCTAAGTGTTTCATTATCTGGACCAGATGGTAGAGTATTAGGTGGTGGGGTGGCTGGTCTTCTAACGGCAGCATCTCCTGTACAGGTGGTCGTGGGGAGTTTCGTCACTGATGGGGGGCACAAGGAATTGAGACAAGTAAACCAAATTGAACAGCCCCCTGTTTCTGCACCCCATAAACTTGCTCCGATCCGTGCTGGAATGACGGGGGCCAGCAGCCCTCCATCGCGTGGGACTCTGAGTGAATCCTCAGGAGGGCCCGGGAGTCCATTTAATCAGAGTGCTGGAGCCTGCAACAATAACACCATACCTTGGAAGTGA 1056 52.65 MSGSETGVISSGEHFTIGLQKNSVQSQPPVMQSMLLPFGADGVYKPVATACPTYQSSSVGVAGNAGADGSARDAFVNVNSQSEPVKRKRGRPRKYGPDGSMAVAPAVRPAAATQSSGGFSPSPTAAPQSGGSASPTSLKKARGRPPGSSTKKHQLDTSESAGVGFTPHVITVKAGEDVSSKIMSFSQNGPRAVCILTANGAISNVTLRQPAMSGGTVTYEGRFEILSLSGSYLLSENGGQRSRTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFVTDGGHKELRQVNQIEQPPVSAPHKLAPIRAGMTGASSPPSRGTLSESSGGPGSPFNQSAGACNNNTIPWK* 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3288150 3290694 - Chy7G132550.1 Chy07g00425 230436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00425 351 Pfam Plants and Prokaryotes Conserved (PCC) domain 167 281 IPR005175 -
Chy07g00425 351 SUPERFAMILY AF0104/ALDC/Ptd012-like 165 288 - -
Chy07g00425 351 MobiDBLite consensus disorder prediction 310 351 - -
Chy07g00425 351 Gene3D - 167 297 - -
Chy07g00425 351 MobiDBLite consensus disorder prediction 113 136 - -
Chy07g00425 351 ProSiteProfiles PPC domain profile profile. 161 301 IPR005175 -
Chy07g00425 351 CDD DUF296 166 280 IPR005175 -
Chy07g00425 351 SMART AT_hook_2 139 151 IPR017956 GO:0003677
Chy07g00425 351 SMART AT_hook_2 86 98 IPR017956 GO:0003677
Chy07g00425 351 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 15 345 IPR039605 GO:0003680
Chy07g00425 351 MobiDBLite consensus disorder prediction 317 351 - -
Chy07g00425 351 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10-LIKE ISOFORM X1 15 345 - -
Chy07g00425 351 MobiDBLite consensus disorder prediction 75 161 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01005 Chy-Chr3:13564868 Chy07g00425 Chy-Chr7:3288150 2.30E-121 dispersed
Chy07g00425 Chy-Chr7:3288150 Chy11g01635 Chy-Chr11:22872895 2.27E-66 dispersed
Chy07g00425 Chy-Chr7:3288150 Chy06g02136 Chy-Chr6:25703791 9.67E-71 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00425 - - csv:101207513 643.269