Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00426 ATGGAGAAGGGGCCAACTACTGTTTCAGCCATGGAAGCCTTTGAGAAGCTGGAGAAGGTCGGAGAAGGAACTTACGGTAAGGTTTATAGGGCAAGGGAGAAGGCCACCGGCAAGATTGTGGCGCTCAAGAAGACGCGCCTTCATGAAGATGAGGAAGGTGTTCCTCCTACCACTCTCAGAGAGGTTTCTATTCTAAGAATGCTTTCTCGGGATCCTCATATTGTTAGGTTGATGGATGTCAAACAAGGCCAGAACAAGGAAGGAAAAACCGTCCTTTACTTGGTTTTTGAATACATGGATACCGATCTGAAGAAATTCATCAAGAGTTTCCGTCATACGGGAGAAAACATTCCCGTTAACACTGTCAAGAGTTTGATGTATCAACTCTGCAAGGGTGTTGCCTTCTGCCATGGCCATGGAATCCTGCACAGGGATCTGAAACCACACAATCTCTTGATGGACCGAAAGACTATGATGCTCAAAATTGCAGACCTTGGGTTGGCTCGAGCATTTACTGTCCCAATTAAGAAGTATACTCACGAGATACTAACCCTCTGGTATAGAGCACCCGAAGTTCTGTTGGGAGCAACTCATTACTCCACAGCTGTAGATATGTGGTCTGTTGCCTGCATATTCGCCGAACTTGCCACCAAGCAGCCTCTCTTTCCTGGAGATTCTGAGTTGCAGCAGCTCCTTCATATCTTCAGGTTATTAGGGACCCCAAATGAAAAGGTCTGGCCTGGTGTGAGCAAACTAATGAACTGGCATGAGTATCCCCAGTGGAACCCCCAAAGCCTTTCAACTGCAGTCCCCAACTTGGATGATAAAGGGCTTGATCTGCTTTCAAAAATGTTGAAGTACGAACCCTCAATGCGTATTTCAGCCAAGAAGGCAATGGAACATCCTTACTTTGATGACTTGAACAAGGAATATCTCTGA 939 46.11 MEKGPTTVSAMEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHIVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIKSFRHTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSTAVDMWSVACIFAELATKQPLFPGDSELQQLLHIFRLLGTPNEKVWPGVSKLMNWHEYPQWNPQSLSTAVPNLDDKGLDLLSKMLKYEPSMRISAKKAMEHPYFDDLNKEYL* 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3293583 3295352 + Chy7G132560.1 Chy07g00426 230437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00426 312 SMART serkin_6 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00426 312 Gene3D Phosphorylase Kinase; domain 1 9 100 - -
Chy07g00426 312 Pfam Protein kinase domain 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00426 312 PANTHER CELL DIVISION PROTEIN KINASE 7 309 - -
Chy07g00426 312 SUPERFAMILY Protein kinase-like (PK-like) 9 308 IPR011009 -
Chy07g00426 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Chy07g00426 312 ProSiteProfiles Protein kinase domain profile. 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00426 312 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Chy07g00426 312 Gene3D Transferase(Phosphotransferase) domain 1 102 311 - -
Chy07g00426 312 PANTHER - 7 309 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01582 Chy-Chr3:17871377 Chy07g00426 Chy-Chr7:3293583 3.69E-43 dispersed
Chy07g00426 Chy-Chr7:3293583 Chy08g00540 Chy-Chr8:12919239 3.70E-148 dispersed
Chy07g00426 Chy-Chr7:3293583 Chy03g01669 Chy-Chr3:18451766 2.27E-87 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71371 PF00069 Pkinase 3.20E-71 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00426 K07760 - csv:101208001 638.262