Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00435 ATGACGAGTCCGTCACCAGAGATTGCAATGGCGCTAGTTCAGCCACACACTCCGGCTTCTTCAATTTCATCTTCATCCGCTTCATTATTCGGAACTTATCTTCAACAACTCCGTCCGCTCACCACAACCCTTAATCTTCGAAGCAACCACTCTATCTCTCATCGTTCCACTTGCAGAGCTTCCTGGCAGGAGCTTGCAGGTGTTCTAATATTCTCTGCAATTCCTTTCACGGCGGTTAAAGCCATTGCTAATAGCCCACTTGGAGAGTCGCTCCAGAGACAATTGGAAAAGAAGAAAAGTTCTGCCGTAGCCAACTCTTCCAAGTTCAAGGCTCTTGCTGAGGAGGCTAGAAAAGATAGCTTGTGGTATGGAGAAGAGCGTCCTCGGTGGCTTGGTCCACTACCATATGATTATCCAAAATATCTGACAGGTGAACTGCCTGGTGATTATGGATTTGATATTGCAGGTTTGAGTGAGGATCCTGTGGCTTTCCAGAAATTCTTCAACTTTGAAATATTGCATGCTCGTTGGGCTATGTTAGCATCCCTTGGTGCTTTAGTTCCAGAGATCTTGGATATTTTTGGAGCCTTTCATTTCACTGAACCCATCTGGTGGCGAGTGGGCTATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCACTTAGCTGGAAGTCAAGGAGTGATTGTCATTGCAATTTGCCAAGCCATTTTGATGGTTGAGTTGGTTAATCTCAATCAAATCTCATCCATTCCCACAAGAACGCAAGTGTTTTGGTTCCTCATGCAGTCTCTACAACGAGCACTGGCCCTTGATAAGCTTGTTGAGGAACTTGGAATTTAA 858 44.99 MTSPSPEIAMALVQPHTPASSISSSSASLFGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKSSAVANSSKFKALAEEARKDSLWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVELVNLNQISSIPTRTQVFWFLMQSLQRALALDKLVEELGI* 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3334144 3341656 + Chy7G132650.1 Chy07g00435 230446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00435 285 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 55 246 IPR001344 GO:0009765|GO:0016020
Chy07g00435 285 Gene3D Chlorophyll a/b binding protein domain 129 266 - -
Chy07g00435 285 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 7, CHLOROPLASTIC 55 246 - -
Chy07g00435 285 Pfam Chlorophyll A-B binding protein 139 249 IPR022796 -
Chy07g00435 285 SUPERFAMILY Chlorophyll a-b binding protein 121 252 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00435 Chy-Chr7:3334144 Chy01g00514 Chy-Chr1:3707462 3.81E-33 dispersed
Chy07g00435 Chy-Chr7:3334144 Chy02g00166 Chy-Chr2:1171702 7.16E-32 transposed
Chy07g00435 Chy-Chr7:3334144 Chy11g01011 Chy-Chr11:14276644 3.49E-31 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00435 K14172 - csv:101209460 458.759