Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00436 ATGGAATGTTTTGATGAGAGGGGGGAGATAAAGAACTATCTGACTGCTACTTTAAAGAACAAAGTGCTTCGTCAAAATCCTCGTCATCAGAGGCCTCGTTGTCGTCAGAAACCTTTTCATGCGATTAACAATTGGAAAATTGAACTCCAAGTTGGACCCGAATATGCAAGATATTGTGGCATAGAGGCATTGGAGCCTCTGGGAATATATCTGCCGGGGGATATAAATTATCCAGGTGGTGTGTTGTTTGATCCCTTGAATCTGTCCAAGGAAGCTGCAGCCTTTGAGGAACTAAAAGTAAAAGAGATTAAAAATGGGCGTTTAGCCATGGTTGCCTGGCTAGGATTTTACAGTCAAGCTGCTTTGACGGGTAAGGGACCAGTCCAAAACCTTCTTGACCACATTGCAGATCCTTTCCACAATAACTTTCTTTCCCTGCTCAATTCTTCATTAAGTAGTTGA 462 42.42 MECFDERGEIKNYLTATLKNKVLRQNPRHQRPRCRQKPFHAINNWKIELQVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKEAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNNFLSLLNSSLSS* 154
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3342271 3342974 + Chy7G132660.1 Chy07g00436 230447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00436 153 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 7, CHLOROPLASTIC 47 144 - -
Chy07g00436 153 SUPERFAMILY Chlorophyll a-b binding protein 52 149 - -
Chy07g00436 153 Pfam Chlorophyll A-B binding protein 68 120 IPR022796 -
Chy07g00436 153 Gene3D Chlorophyll a/b binding protein domain 35 152 - -
Chy07g00436 153 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 47 144 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00436 Chy-Chr7:3342271 Chy02g01569 Chy-Chr2:13904381 1.33E-23 dispersed
Chy07g00436 Chy-Chr7:3342271 Chy11g01011 Chy-Chr11:14276644 3.88E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00436 K14172 - csv:101209460 189.119