Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00478 ATGTTGTATGTTCCCGATACGATTTCAACTCCCACATTAATGATAATAGTAAGTATTGTTTTACTCTTATTATTATTATTGGGATGGAAATTAGCTGATTGGATTTGGTTCCGCCCGAAGAAATTAGAGAAGCTTTTAAGACAGCAAGGGTTCGCCGGGAATTCATACCGGATTCTCCACGGCGACTTGAAGGAGAGAGCCGCCATGAGAGAGGAAGCAATGTCCAAGTCTATGAACTTCTCCAATCATATTGCTCCACGTGTCATTCCCTCTGTCTATCATACCATCCAACGTTATGGCAAGAATTCATTTATGTGGCTTGGTCCCATGCCAAGAGTGCACATAATGGACCCTGAACAACTTAAAACTGTGTTCTCATTCTTCAATGATTTTCAAAAGCCAACTATGAATCCCTTTACCAAGTTGCTTGTACAAGGAATTGTAAATCTTGAAGGAGAAAAATGGGTCAAACACAGAAAGATTATCAACCCTGCATTTCATTTAGAAAAGCTCAAGGATATGGTACCAGCATTCTATCACAGTTGTAACGAGATGGTTAGCAAGTGGGAAAGCATGCTCTCTAGAGAGGGATCATGTGAGTTAGATGTAATGCCTTATCTCAAAAATATGGCTTCCGATGTGATTTCTCGAACTGCATTTGGGAGCAGCTATGAGAAAGGAAAAAAGATCTTCAAGCTTCAAACTGAACTAGCTGATTTTGTGATTCAAACTACCTTAGGGATATATATTCCTGGATGGAGATTTCTACCCACAAAGTTAAACAGAAAAATGAAAGAGATAAGCAAAGAGATAAGAACTTTGATATTGGGTATTATGAATGAAAGAGAAAAGTCTATGCAAGCAGGTGAAGCAATACAAACTGATCTGTTAAGCATTCTCATGGAATCCAATATGAATGAAATTAAACAACATGGAAACAATAAAGACATTGGAATGAGTATAGAAGAAGTTATTGAAGAATGCAAGCTTTTCTATATTGCTGGCCAAGAAACTACAGCAACATTACTAGTCTGGACGATGGTATTGTTGAGTTCGTACTCAGAATGGCAAGAGCGTGCAAGAGCAGAAGTCTTTGAGATCTTTGGTAACAAGCAACCAAGTTATGATGGTTTAAATAGACTAAAAGTTGTAACTATGATCTTCAATGAGGTTCTCAGGTTATACCCACCAGTGAGTCTGTTTGGTCGCATTGTAAGGAAAGAAACAAGACTTGGAAATTTGACTTTACCAAGAGGAGTAATGTTAGGCTTACCAATTGTTCTTATCCAACGTGACCCTGAGTTATGGGGAGAAGATGCACATGAATTCAATCCAGAGAGATTTTCTGGAGGAGTTTCTAAAGCAACAAAAAATCCAAGTGCTTTTATACCATTTGGATGGGGTCCTAGAATATGCATAGGACAAAACTTTGCAATGATTGAAGCAAAAATGGCATTATCAATGATTCTACAACGTTTCTCATTTGAGCTTTCGCCATCATACACACACTCTCCCATTGCCGCTTTAACAACACAACCTCAACATGGAGCTCATATCATACTACACAAACTCTAG 1575 38.29 MLYVPDTISTPTLMIIVSIVLLLLLLLGWKLADWIWFRPKKLEKLLRQQGFAGNSYRILHGDLKERAAMREEAMSKSMNFSNHIAPRVIPSVYHTIQRYGKNSFMWLGPMPRVHIMDPEQLKTVFSFFNDFQKPTMNPFTKLLVQGIVNLEGEKWVKHRKIINPAFHLEKLKDMVPAFYHSCNEMVSKWESMLSREGSCELDVMPYLKNMASDVISRTAFGSSYEKGKKIFKLQTELADFVIQTTLGIYIPGWRFLPTKLNRKMKEISKEIRTLILGIMNEREKSMQAGEAIQTDLLSILMESNMNEIKQHGNNKDIGMSIEEVIEECKLFYIAGQETTATLLVWTMVLLSSYSEWQERARAEVFEIFGNKQPSYDGLNRLKVVTMIFNEVLRLYPPVSLFGRIVRKETRLGNLTLPRGVMLGLPIVLIQRDPELWGEDAHEFNPERFSGGVSKATKNPSAFIPFGWGPRICIGQNFAMIEAKMALSMILQRFSFELSPSYTHSPIAALTTQPQHGAHIILHKL* 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3817021 3820439 - Chy7G133080.1 Chy07g00478 230489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00478 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Chy07g00478 524 PANTHER CYTOCHROME P450 FAMILY MEMBER 18 520 - -
Chy07g00478 524 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00478 524 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00478 524 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00478 524 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00478 524 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00478 524 PRINTS E-class P450 group I signature 96 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00478 524 Gene3D Cytochrome P450 79 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00478 524 PANTHER CYTOCHROME 18 520 - -
Chy07g00478 524 Pfam Cytochrome P450 97 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00478 524 SUPERFAMILY Cytochrome P450 86 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00478 524 Coils Coil 521 524 - -
Chy07g00478 524 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00478 524 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00478 524 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy07g00478 524 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01546 Chy-Chr4:22097947 Chy07g00478 Chy-Chr7:3817021 0 dispersed
Chy07g00478 Chy-Chr7:3817021 Chy07g00480 Chy-Chr7:3830584 0 dispersed
Chy10g01069 Chy-Chr10:15833420 Chy07g00478 Chy-Chr7:3817021 9.89E-102 dispersed
Chy07g00477 Chy-Chr7:3804152 Chy07g00478 Chy-Chr7:3817021 0 tandem
Chy07g00478 Chy-Chr7:3817021 Chy07g00479 Chy-Chr7:3823863 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00478 - - csv:101222756 979.933