Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00522 ATGGAAAGATCGAAGAACAGATCCCTTTCAATAAGGGTTGGAGCCGGAAGAAACACGGATCTTTGTGCTTCATCTTCTTGTCCAAAGAAGAAAAAGAGTTATGTTATTATAATTGTAGCGATAGTTTCATTGTTTCTTGTCCTCTTAGCTGCAACATCAGTCTTGATAATATTGTGGAGAAAAAGAGCTCGGAAACAGCCCGTCATAAGACTCGGAACACTAGAGGAAAAAAAACAGCAACTATCTTACTCTGAAATACGACGTATAACAAACAACTTTGAGAGACAAATTGGAGAAGGAGGTTTTGCAAAAGTATTCCTTGGTAATTTGGATGATAGTCAAGTCGCCGTGAAGGTCCTTAAGTCTTCGGTTCAAGGTTATAAAGAATTTGAAGCAGAGGTTAAACTTTTGTTGAGAATTCATCATCGAAACTTGATCAGCCTTGTTGGATATTGCTGCCAAAAAACCAACCTGGTTCTAATTTATGAGTACATAAACAATGGCAACTTAAAAGAGCATCTATCAGGTAGCAAAGCCAGTGTTCTCAGTTGGGAGGAAAGGATGCAAGTAGCAGTCAATTCAGCTCAAGGGTTGGAGTATCTGCATCATGGTTGTAGGCCACCGATTGTTCATAGAGATGTGAAATCTGCAAACATCCTTTTGAATGAAAGATTCCAAGCTAAAATAGCTGATTTTGGTCTATCCAAGAGTTTTCCAACTGAAAGCCGTACTCATATGACAACCATTGTTGCGGGGACCGATGGTTATCTCGATCCTGAGTATTATGCAACTGGTTGGTTGACTGAGAAAAGTGATGTTTATAGTTTTGGAGTTCTTGTATTGGAAATCGTCACTTCCCGTCCAGTCCTGATGATCGACAGAGCTTCTTCACAGAAATATCATATAAGCCAATGGGTTATGCAATTGATGAAAACAGGTGATATAAGGAGCATTGTTGATCAAAAGGTGAGGGAAAACTTTGACTTGAGTTCTGCTTGGAAGGCAGTGGAGATTGCAATGAAATGTTTGTCATTGAATTCCATTGATAGGCCAAGCATGAAAGAGGTAGTTTCAGAGTTGAGCGAGTGTTTGGCGTTAGAGAAAGCTCGGAAAAGAAGAAACGCTGACACTGACATGAGAAAATCAAATCCAGTTAGGAGAAATTTCAGAGAGAGTGAAGTAACACCTTTTGCTAGATAG 1200 39.5 MERSKNRSLSIRVGAGRNTDLCASSSCPKKKKSYVIIIVAIVSLFLVLLAATSVLIILWRKRARKQPVIRLGTLEEKKQQLSYSEIRRITNNFERQIGEGGFAKVFLGNLDDSQVAVKVLKSSVQGYKEFEAEVKLLLRIHHRNLISLVGYCCQKTNLVLIYEYINNGNLKEHLSGSKASVLSWEERMQVAVNSAQGLEYLHHGCRPPIVHRDVKSANILLNERFQAKIADFGLSKSFPTESRTHMTTIVAGTDGYLDPEYYATGWLTEKSDVYSFGVLVLEIVTSRPVLMIDRASSQKYHISQWVMQLMKTGDIRSIVDQKVRENFDLSSAWKAVEIAMKCLSLNSIDRPSMKEVVSELSECLALEKARKRRNADTDMRKSNPVRRNFRESEVTPFAR* 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4244476 4248198 - Chy7G133520.1 Chy07g00522 230533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00522 399 Gene3D Phosphorylase Kinase; domain 1 54 164 - -
Chy07g00522 399 MobiDBLite consensus disorder prediction 372 388 - -
Chy07g00522 399 CDD STKc_IRAK 97 362 - -
Chy07g00522 399 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE 1 375 - -
Chy07g00522 399 ProSitePatterns Protein kinases ATP-binding region signature. 97 118 IPR017441 GO:0005524
Chy07g00522 399 SUPERFAMILY Protein kinase-like (PK-like) 75 360 IPR011009 -
Chy07g00522 399 MobiDBLite consensus disorder prediction 372 399 - -
Chy07g00522 399 ProSiteProfiles Protein kinase domain profile. 91 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00522 399 SMART serkin_6 91 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00522 399 Pfam Protein tyrosine and serine/threonine kinase 93 360 IPR001245 GO:0004672|GO:0006468
Chy07g00522 399 PIRSF TyrPK_CSF1-R 8 194 - -
Chy07g00522 399 PIRSF TyrPK_CSF1-R 171 294 - -
Chy07g00522 399 PIRSF TyrPK_CSF1-R 330 396 - -
Chy07g00522 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Chy07g00522 399 Gene3D Transferase(Phosphotransferase) domain 1 165 388 - -
Chy07g00522 399 PANTHER OS07G0107800 PROTEIN-RELATED 1 375 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g02233 Chy-Chr1:26729055 Chy07g00522 Chy-Chr7:4244476 2.63E-71 dispersed
Chy04g00615 Chy-Chr4:6974748 Chy07g00522 Chy-Chr7:4244476 1.00E-87 dispersed
Chy04g02095 Chy-Chr4:26324861 Chy07g00522 Chy-Chr7:4244476 1.51E-81 dispersed
Chy07g00522 Chy-Chr7:4244476 Chy01g02238 Chy-Chr1:26763373 2.03E-108 dispersed
Chy07g00522 Chy-Chr7:4244476 Chy01g02228 Chy-Chr1:26698708 2.85E-108 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71373 PF07714 PK_Tyr_Ser-Thr 4.80E-49 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00522 - - csv:101209804 751.895