Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00654 ATGGGTGCTGAAACAGGGCTTGCAATGTTTTGTGGAATTATTCAAAAAATAAAACCCTACTTGGCTATGGTTTCCCTGCAATTTGGTTATGCAGGGATGTATATTATCACCATGCTTTGTCTTAAGAAAGGGATGAACCATTACGTTCTCGCCGTCTATCGACATGTCGTTGCCACCATTGTTATCGCCCCCTTTGCTATTGTCCTTGAAAGAAAGATAAGGCCGAAGATGACATTAGGAATCTTTGCACGAGTATTGCTCCTTGGATTTCTCGAGCCTGTGTTGGATCAAAATCTATACTATGTGGGTTTGAAACTTACCTCAGCAACGTTTACCTCTGTCACCATCAATATTCTACCTGCAGTTACTTTCATTATGGCTCTCATTTTCAGGCTAGAAAGTGTGAACTTCAAGAAGATCCGTAGCATTGCGAAGGTGGCAGGAACATTGGTAACAATCGGCGGAGCAATGGTGATGACTCTATACAAAGGACCAATCGTGGACATATTTCACGGTCATGGACGCCATGCCGCCCACCACAGCAGCAGCAGCGAGTCTGCTGACCAACACTGGGTCCTCGGCACCCTCATGCTCCTCGGCAGCATCGTGGGCTGGTCGGGCTTCTTCATCTTACAATCGTTCACGCTGAGAAAATACCCGGCGGAGTTGTCGTTAACGGCCCTGATATGCGTAGCCGGTGCGGTGGAGGGCTCGATTGTGACGCTTATTATGGAGCGTGACTTTACCGTGTGGGTCATCGGCTGGGACTCTCGTCTTCTTGCCGCTGTATATACTGGTGTGATATGCTCTGGACTTGCATATTACATACAAGGTGTGGTAATTCGGGAACGCGGCCCAGTTTTTGTTACCTCTTTTACCCCTCTCTGCATGATTATTACCGCCATTCTTGGCTCCATTGTTTTGGCTGAGCAAATTCACCTTGGAAGCATAATAGGAGCAATTTTCATAGTGATGGGGCTATACTTAGTGGTGTGGGGAAAAGCCAAAGACCACATAAACAAATTGACGAATCAAAAAAGCAACGCCGCCACCGAATTACCGATCACCAACGAGCCGGAAACTACCGCCGCCGAGCGTTGTTCTTCAAAAGCTCCACCGGCTTGA 1125 47.47 MGAETGLAMFCGIIQKIKPYLAMVSLQFGYAGMYIITMLCLKKGMNHYVLAVYRHVVATIVIAPFAIVLERKIRPKMTLGIFARVLLLGFLEPVLDQNLYYVGLKLTSATFTSVTINILPAVTFIMALIFRLESVNFKKIRSIAKVAGTLVTIGGAMVMTLYKGPIVDIFHGHGRHAAHHSSSSESADQHWVLGTLMLLGSIVGWSGFFILQSFTLRKYPAELSLTALICVAGAVEGSIVTLIMERDFTVWVIGWDSRLLAAVYTGVICSGLAYYIQGVVIRERGPVFVTSFTPLCMIITAILGSIVLAEQIHLGSIIGAIFIVMGLYLVVWGKAKDHINKLTNQKSNAATELPITNEPETTAAERCSSKAPPA* 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6254589 6257657 - Chy7G134840.1 Chy07g00654 230665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00654 374 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Chy07g00654 374 Pfam EamA-like transporter family 31 144 IPR000620 GO:0016020|GO:0016021
Chy07g00654 374 PANTHER WAT1-RELATED PROTEIN 13 356 - -
Chy07g00654 374 MobiDBLite consensus disorder prediction 350 364 - -
Chy07g00654 374 MobiDBLite consensus disorder prediction 350 374 - -
Chy07g00654 374 PANTHER WAT1-RELATED PROTEIN 13 356 IPR030184 GO:0016021|GO:0022857
Chy07g00654 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 335 - -
Chy07g00654 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00876 Chy-Chr3:12027949 Chy07g00654 Chy-Chr7:6254589 8.65E-136 dispersed
Chy05g00334 Chy-Chr5:3448147 Chy07g00654 Chy-Chr7:6254589 6.28E-85 dispersed
Chy05g00601 Chy-Chr5:7141744 Chy07g00654 Chy-Chr7:6254589 9.08E-36 dispersed
Chy07g00654 Chy-Chr7:6254589 Chy08g00232 Chy-Chr8:5223604 1.45E-121 dispersed
Chy07g00654 Chy-Chr7:6254589 Chy08g00779 Chy-Chr8:15468048 5.85E-131 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00654 - - csv:101216002 703.745