Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00710 ATGCCAACGGGCGTGCGCGTGGCAGGGCTTATGCGCGCACCGGCCCCATTGATCAGCGCCGCTTCTTCCTTCTTCTTCCTCTTTTTCTTACTCTCATCATCATGCATAATTGTGGTCTTCTCGGCTTCTGATGCCGAAACTTTGCTCCAATTCAAGCGATCTTTGACATCGGCCACGGCTCTTAACAATTGGAAACCTTCGGTTCCGCCTTGCGAGAACCACAAGGCGAATTGGGCTGGAGTGCTTTGTTTGAATGGGCACGTTAGAGGTCTAAGGCTTGAAAATATGGGACTTAAGGGAGAAGTTGATATGAATTCCCTGGTTTCATTGACTCGTTTGCGTACACTTAGCTTCATGAACAACACATTGGTTGGGTCTTGGCCTCCTGTTATAAGCAAATTAGGAAGTTTGCGGTCTGTTTATCTTTCCTATAACCATTTTTCAGGAGAAATCCCAGATGATGCCTTTACGGGTATGAAATTTTTGAAGAAAGTATTTTTGACCAATAATGAATTCAACGGCCCAATTCCCTCATCTCTCGCTTCACTGTCTAGGCTTATGGAGTTGAGACTCGATGGTAACAAATTCAAAGGCCAAGTCCCTCCACTTCAAATACATACTTTGACCAAACTCAATGTTTCCAACAACGAATTGGTCGGCCCTATTCCTACTAGTTTAAGCCATATGGATCCTTCATGCTTTTCAGGCAACATTGATCTATGTGGGGATCCACTACCAGAATGCGGAAAAGCCCCAATGTCATCCTCGGGGCTACTAAAGATCGCAGTGATAGTCATAATTGTGGGGCTAACATTAGCAGTAATAGCTGCAATTTTCATCATATTGAATTTAAGAAACCAGCCAGCAGCATTACAACTAGGGAAGGAGAATGCAGGGATGATAAACATGGAAGATCAGGATCAGAACAAATACGTGAACGCTAAGCAGGTAACAGCAGGGGTAGGGGAAGGATATAGATCAATAGAGTCGTCATCGTCGTCTGTTGCTCAGGCAACGAGGCGAGGAGGGGCTGAGCATGGAAAACTGTTGTTTGTGAGGGAGGACAGGGAGAGGTTCGATTTACAAGACTTGTTAAGAGCGTCGGCAGAAATATTGGGTAGTGGGTCATTTGGTTCGTCGTATAAAGCAACAATACTTAGTAATGCAGTGGTGGTGAAGCGTTATAAGCATATGAATAATGTGGGAAGAGAAGAGTTTCATGAGCATATGAGAAGGTTAGGGAGGTTGACTCATCCCAATTTACTTCCTTTGGTTGCTTACTATTATAGGAAGGAAGAGAAGCTGTTGATTTCAGACTTTGTGGATAATGGGAGTTTGGCCAGCCATTTGCATGGGAACCACAACCTGGAAGAGGCAGGACTAGATTGGGCAACAAGATTGAAGATCATAAGAGGCATAGCAAGGGGCCTTTCTTACCTGTACACCTCGCTCCCAAACGTATTAGCAGCACATGGACATCTCAAATCTTCAAATGTGTTGCTAGACGAGTCCATGGAGCCATTGCTGACAGACTACGGTCTAAGCCCAGTAGCCAATCTAGAGCAAGGGCAGAGTCTAATGATGGCGTACAAATCCCCTGAGTATGCTCAAATGGGTCGCATAACCAAGAAGACAGACGTCTGGAGTTTCGGAATAGTCATTCTTGAAATGTTAACTGGCAGATTCCCAGAGAACTACCTGACACGAAACCACGACCCGAAAGCCGACCTTGCGGCTTGGGTTAACAACATGATCAAGGAAAAGAAGACGGCGCAAGTGTTTGACCCCGAGCTGGGGCGAGCCAGGGAGAGTAGTAAAGGGGAGTTGCTGAAGATGCTTAAGATTGCGTTGAGTTGCTGTGAGGAAGATGTGGATAGACGATTGGATTTGAATCAAGTAGCTGCAGAGATTGAAGATTTGAATGATGAAGATTTGAGTGATGATAATGATGATGATGATGGACATAATTTCTCCCCTACTTCTCGCCATATTCATATTGCTGTTTGA 2007 44.99 MPTGVRVAGLMRAPAPLISAASSFFFLFFLLSSSCIIVVFSASDAETLLQFKRSLTSATALNNWKPSVPPCENHKANWAGVLCLNGHVRGLRLENMGLKGEVDMNSLVSLTRLRTLSFMNNTLVGSWPPVISKLGSLRSVYLSYNHFSGEIPDDAFTGMKFLKKVFLTNNEFNGPIPSSLASLSRLMELRLDGNKFKGQVPPLQIHTLTKLNVSNNELVGPIPTSLSHMDPSCFSGNIDLCGDPLPECGKAPMSSSGLLKIAVIVIIVGLTLAVIAAIFIILNLRNQPAALQLGKENAGMINMEDQDQNKYVNAKQVTAGVGEGYRSIESSSSSVAQATRRGGAEHGKLLFVREDRERFDLQDLLRASAEILGSGSFGSSYKATILSNAVVVKRYKHMNNVGREEFHEHMRRLGRLTHPNLLPLVAYYYRKEEKLLISDFVDNGSLASHLHGNHNLEEAGLDWATRLKIIRGIARGLSYLYTSLPNVLAAHGHLKSSNVLLDESMEPLLTDYGLSPVANLEQGQSLMMAYKSPEYAQMGRITKKTDVWSFGIVILEMLTGRFPENYLTRNHDPKADLAAWVNNMIKEKKTAQVFDPELGRARESSKGELLKMLKIALSCCEEDVDRRLDLNQVAAEIEDLNDEDLSDDNDDDDGHNFSPTSRHIHIAV* 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7011152 7014212 - Chy7G135400.1 Chy07g00710 230721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00710 668 Pfam Protein tyrosine and serine/threonine kinase 370 635 IPR001245 GO:0004672|GO:0006468
Chy07g00710 668 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 649 - -
Chy07g00710 668 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Chy07g00710 668 SUPERFAMILY Protein kinase-like (PK-like) 370 638 IPR011009 -
Chy07g00710 668 Gene3D Ribonuclease Inhibitor 41 204 IPR032675 -
Chy07g00710 668 Gene3D Ribonuclease Inhibitor 205 252 IPR032675 -
Chy07g00710 668 Gene3D Transferase(Phosphotransferase) domain 1 441 661 - -
Chy07g00710 668 MobiDBLite consensus disorder prediction 641 668 - -
Chy07g00710 668 SUPERFAMILY L domain-like 68 230 - -
Chy07g00710 668 Pfam Leucine rich repeat N-terminal domain 42 83 IPR013210 -
Chy07g00710 668 Gene3D Phosphorylase Kinase; domain 1 330 440 - -
Chy07g00710 668 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 19 649 - -
Chy07g00710 668 ProSiteProfiles Protein kinase domain profile. 366 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02288 Chy-Chr2:26926467 Chy07g00710 Chy-Chr7:7011152 0 dispersed
Chy03g01215 Chy-Chr3:15268240 Chy07g00710 Chy-Chr7:7011152 1.34E-167 dispersed
Chy05g01482 Chy-Chr5:18581234 Chy07g00710 Chy-Chr7:7011152 5.70E-145 dispersed
Chy07g00710 Chy-Chr7:7011152 Chy06g01346 Chy-Chr6:13079193 5.20E-109 dispersed
Chy07g00710 Chy-Chr7:7011152 Chy04g00284 Chy-Chr4:2522498 1.18E-19 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71376 PF07714 PK_Tyr_Ser-Thr 1.60E-30 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00710 - - csv:101203276 1233.39