Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00740 ATGCCTGCAGACAAACATGATGAGAGACATAATATGATTAAAAATTCTAAAGAAGAGAATTCACCACCTCCAAAACTAGCAGCAGGTTCAGCAAGCTCATCCGCGACGCCATGGCTTAGGTTGAAGGATCCAAGGATTGTGCGCGTGTCGCGAGCTTTCGGAGGCAAAGATCGACACAGCAAAGTTTGTACCATAAGAGGACTGCGCGACAGGCGTGTAAGACTATCAGTTTCCACCGCAATTCAACTCTATGATCTTCAAGACAGGCTGGGGCTTAACCAGCCGAGCAAGGTTGTCGACTGGTTGCTGAACGCCGCCAAGGATGAAATCGACGAACTCCCTCCTTTACCAATCCCGTCCGCAAGCCTCGGCCTTCACTACCAATCAATGGTACCAACAACAACAACAGTCGTACACCCCCATAGATCGGAGTTCAAAATCATTGACAAGGCCGGGGTCGAGGACGAGACAGAACAAAAACAACACAAATCCAATAGTAATCCTTCTCACCCTAATTCTTCTTTCTCAGCCCTTTTGAATAATGTTTCTGCCCCTCCATTTGGTTTTTATTGGGATCATAATCCTCCATCATCATCATCATCATCATCAACAAACAATAATCTTCCATTTCTTACATCTCAAGCTGGGGATAATAATAACAACAATAACCTTCATACCTTCAATCATCTCAATTTGTCTTTGCCTCCTTCCCCTTTGTCTCTCTCAACTGCCTCTCAGTTTTTGGAGTTCAATCACTTGCACCAAAATTTCTTCATTAACAACAACAACAACAACAATAATCCTTCTTTCCACCCAAATGTTAGGCCTTTTCACTTTAGTATGGCTACTAAATTCCTTCCCCATCAAGACAAGAATAATAACAATGTAGATCCTACAAGTAAGGATCATGGATTTGCGTCTCATCAATGA 930 43.01 MPADKHDERHNMIKNSKEENSPPPKLAAGSASSSATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLHYQSMVPTTTTVVHPHRSEFKIIDKAGVEDETEQKQHKSNSNPSHPNSSFSALLNNVSAPPFGFYWDHNPPSSSSSSSTNNNLPFLTSQAGDNNNNNNLHTFNHLNLSLPPSPLSLSTASQFLEFNHLHQNFFINNNNNNNNPSFHPNVRPFHFSMATKFLPHQDKNNNNVDPTSKDHGFASHQ* 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7726894 7728415 - Chy7G135700.1 Chy07g00740 230751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00740 309 Pfam TCP family transcription factor 55 167 IPR017887 -
Chy07g00740 309 MobiDBLite consensus disorder prediction 287 309 - -
Chy07g00740 309 MobiDBLite consensus disorder prediction 1 35 - -
Chy07g00740 309 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 292 IPR005333 GO:0003700
Chy07g00740 309 MobiDBLite consensus disorder prediction 149 163 - -
Chy07g00740 309 PANTHER OS05G0513100 PROTEIN 21 292 - -
Chy07g00740 309 MobiDBLite consensus disorder prediction 1 16 - -
Chy07g00740 309 MobiDBLite consensus disorder prediction 149 177 - -
Chy07g00740 309 MobiDBLite consensus disorder prediction 196 222 - -
Chy07g00740 309 ProSiteProfiles TCP domain profile. 55 113 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02437 Chy-Chr2:28028803 Chy07g00740 Chy-Chr7:7726894 1.56E-40 dispersed
Chy07g00740 Chy-Chr7:7726894 Chy07g00959 Chy-Chr7:14208925 7.24E-25 dispersed
Chy02g00132 Chy-Chr2:940275 Chy07g00740 Chy-Chr7:7726894 7.39E-31 transposed
Chy12g01493 Chy-Chr12:18794826 Chy07g00740 Chy-Chr7:7726894 2.02E-34 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18303 PF03634 TCP 5.60E-28 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00740 - - csv:101216548 528.48