Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00809 ATGGGGAGTCCTGGATCTGGTGCGGTTGATTATGCTGTGGGATCGATCGTGTGGGTTCGAAGGAGGAATGGTTCATGGTGGCCTGGTAAAATCTTGGGTTCTGATGAGCTTTCATCTTCGCACCTTACATCACCTCGATCTGGAACTCCGGTCAAGCTCCTTGGAAGAGAAGATGCCAGTGTGGATTGGTACAATTTAGAAAAGTCCAAGCGAGTAAAACCATTTCGATGTGGTGAGTTTGATGATTGTATTGAAAGGGCAGAGTCCTCGCAAGGCATGCCAATAAAGAAGAGAGAGAAATATGCGCGAAGGGAGGATGCTATTCTTCATGCTCTTGAACTTGAGAAGGAACTACTGAATAAGCAAGGAAAACTTAACTTATATTCTGATCAAATGACTATTGAATCCCCTGGTGCCACTGCAAAGGAAGGAATACTTTTTTCAGAACATATAGGAACTGATGATCACAACGATGGACATTCTGAATCACACCAATTTTCTAAGACAATACATGTAAGCTATGACAATGAAATCACGGAACCATGTCTTAAAGCAAATGAAGGAGCACAGCGTAGTGGTGAGGATGACCATTCTGAATCAAGGCCGAGAATGAGAGGCTTGCAGGACTTTGGACTCAGAATTACTTCTTCCAAAAGAAAGTTTCTATCTTCCTCTGTTGTCTCGAATGGTTTTGAAATGCTTGCAACTGATACCAATGCTCTGGCTCCTTCCAATGTTTGTAACATAGGAAATGACTGCGATGCAAATGGGATGCAGCAAATCGATCGGGCGAAGAGGAGCAAGTGTATGTATCTTCCAGCTGATTCTAGTGATTCATTGGAATGCAGAGAATCTTCTCTAGGTCAAGTTGAGATGTCAACACCTGATTTAGGAACTGGGGTTATTCCTTCCCAGCCTGATTCCCTTCTTGAAGGAAACGCTTCTGGTTCATCTGAAAATGATTCTTCTGACTCAGAGACTGATTCCGATTCTTCCAGGTCAGATCAGGACATGGATAATGAGATGACTGCACTTTCAGATTCTACTTTGCCTTCAGAAAAGGAGCTGAGTACATTTGAAAGAACGGACACACGAGAGCATGGAAATATGAGCAGCGAGGAACCTGATGATTCTGTGCATTCTGGTGATATGTCTCACCTTTATCATCACGACCCTGTATCTACTAATGAAGCAGTGTCTAAGTGGAAATTGAAGGGAAAAAGAAATGTTCGTAATTTTTCTAAAAAACTCGTTGGAGTAGATGAGGAACCATTAAGCCACCTATGGGTACATGCCCAAACAAGACTCAATAATAGGAATGATTACTTTGATGATAGCATGGATGGAGTTGATGCATTGGAAGAGGAATATTACTTTACGTCTAAAATGGTATCAAAAGATCAATATTTTGTCAGAAATTATTTGCTTGACTGGGAAGGTCAACCTGCTTTGAAAGGATATTGGGATGTAAAAAATCCCTTATATGGTATACCTCATCATTTTGGTGAGAGGCCAAGAACTATATTAATAGATGTTGATCTGAAGGTCCATGCAAGTTACCAAAAAGAGCCTGTTCCTATCGTATCACTTATGAGCAAGTTAAATGGGCAAGCTATAATTGGGCATCCTATTCAAATCGAAACTCTAGAAGATGGTTTTTCTGAAACTATTCTTTCTGATAGTCTAGGCAATGCACCTAGTGAAAATGATGGAAGCACAGCGCTCCAACCAGCTTGGAGGACTGCAAGGAGGACGGCAAATGTTCGTATCCCTCGCCCTCATTTACCAACAGTACCGGTTGGTAAAGAAGCTGGTTATGATTCACAAGAAAGGAAATCAAGATTGAAAAAAGTAAAAACTGGGGTCTACCTTTCGAAGGCAGGCCAGCCTCACATTCCCCGAGGACCTTCAAATGATAGAAGGCTCCCAAAAAAGATGGCTAAGAAAGTAAGCTTATCATCTAACCAGAAGACTAGAACTTTATCTTCAATAGATGTTGAGCAGAATTTTGGTAACATGCCAATACATGATAGTGTGTTTGTAGGAGCTGTGGTGTCTGAAAAGGTGAACTTCGACTCTCAGCATCGTTTTCTCTCTTCCCCCTGTCTTTCGCATTTGGTGTCCACTCAGCTGCCGTCGCCGTCGACTACTCAGCTACCGTCGCCGTCGACTTCTCAGCTACCACTGCCATTGACTCCTACTACCAAGGTTGAAGCTTTTGTTGAAATGGCTGGTCAATCAGATCCTCACCTGAACCTATTTTCTGCAGAAGAGGTCGAGTTTGTAGCTGAAGATGAAATGGTGGAGATTATTCCTAATATGAGAATGGATTCTCTGCATTTGATCTGTGGGGATTATGGTCCATTCTATCCCCAAATAGCAACTGAAGTTCCACTGTGGCTAGCAATTGCTCTGAAAAAAAGAGGGAAATGTGCAATTAGGACTCCAGAGTGGATGTCAGTGGAAAAGTTGACACAAATTTTGGAGGCAGAGCGAGATTCTCAAGGATCTTTCCAGATATTACCCTTTCATTACGTGGAAATATCAAAACTTCTTTTTGACCATGCACGAGATGACGTTCCTGACATGTATTTGGTGAGGTCTCTTATTGAAGATATCAGGGATGTTAGGTTTCACAAAGTTGAAACCAGCTTGGAGTCAATCGATACACGCACATCTGCAGTGAAGATTAAAGATCTATCTGCCATGGAAGTGAATATAGTTCGACCGTTCGTCATTAGAGCATTGCAAGCAATTTACAAGCATGGAAATCCAGAATTGGTCCCAGATCAAGATAGGATGACCAATATGCAGACACAAGGACACGATCATGGACAAAGACGGCGGCCTCTTCGAAGACGGTAA 2865 42.2 MGSPGSGAVDYAVGSIVWVRRRNGSWWPGKILGSDELSSSHLTSPRSGTPVKLLGREDASVDWYNLEKSKRVKPFRCGEFDDCIERAESSQGMPIKKREKYARREDAILHALELEKELLNKQGKLNLYSDQMTIESPGATAKEGILFSEHIGTDDHNDGHSESHQFSKTIHVSYDNEITEPCLKANEGAQRSGEDDHSESRPRMRGLQDFGLRITSSKRKFLSSSVVSNGFEMLATDTNALAPSNVCNIGNDCDANGMQQIDRAKRSKCMYLPADSSDSLECRESSLGQVEMSTPDLGTGVIPSQPDSLLEGNASGSSENDSSDSETDSDSSRSDQDMDNEMTALSDSTLPSEKELSTFERTDTREHGNMSSEEPDDSVHSGDMSHLYHHDPVSTNEAVSKWKLKGKRNVRNFSKKLVGVDEEPLSHLWVHAQTRLNNRNDYFDDSMDGVDALEEEYYFTSKMVSKDQYFVRNYLLDWEGQPALKGYWDVKNPLYGIPHHFGERPRTILIDVDLKVHASYQKEPVPIVSLMSKLNGQAIIGHPIQIETLEDGFSETILSDSLGNAPSENDGSTALQPAWRTARRTANVRIPRPHLPTVPVGKEAGYDSQERKSRLKKVKTGVYLSKAGQPHIPRGPSNDRRLPKKMAKKVSLSSNQKTRTLSSIDVEQNFGNMPIHDSVFVGAVVSEKVNFDSQHRFLSSPCLSHLVSTQLPSPSTTQLPSPSTSQLPLPLTPTTKVEAFVEMAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVEKLTQILEAERDSQGSFQILPFHYVEISKLLFDHARDDVPDMYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVIRALQAIYKHGNPELVPDQDRMTNMQTQGHDHGQRRRPLRRR* 955
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9995868 10030131 + Chy7G136390.1 Chy07g00809 230820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00809 954 CDD GINS_A_psf2 808 924 - -
Chy07g00809 954 Pfam GINS complex protein 795 904 IPR021151 -
Chy07g00809 954 SUPERFAMILY PriA/YqbF domain 754 813 - -
Chy07g00809 954 MobiDBLite consensus disorder prediction 189 205 - -
Chy07g00809 954 MobiDBLite consensus disorder prediction 186 205 - -
Chy07g00809 954 MobiDBLite consensus disorder prediction 927 954 - -
Chy07g00809 954 Gene3D - 820 932 - -
Chy07g00809 954 MobiDBLite consensus disorder prediction 354 387 - -
Chy07g00809 954 ProSiteProfiles PWWP domain profile. 13 68 IPR000313 -
Chy07g00809 954 MobiDBLite consensus disorder prediction 709 728 - -
Chy07g00809 954 Gene3D - 6 126 - -
Chy07g00809 954 SUPERFAMILY Tudor/PWWP/MBT 10 117 - -
Chy07g00809 954 MobiDBLite consensus disorder prediction 279 322 - -
Chy07g00809 954 PANTHER T17B22.17 PROTEIN 1 677 - -
Chy07g00809 954 MobiDBLite consensus disorder prediction 592 612 - -
Chy07g00809 954 Gene3D - 754 819 - -
Chy07g00809 954 MobiDBLite consensus disorder prediction 277 392 - -
Chy07g00809 954 PANTHER T17B22.17 PROTEIN-RELATED 1 677 IPR044679 -
Chy07g00809 954 SUPERFAMILY GINS helical bundle-like 816 924 IPR036224 -
Chy07g00809 954 Pfam PWWP domain 14 94 IPR000313 -
Chy07g00809 954 MobiDBLite consensus disorder prediction 338 353 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g02219 Chy-Chr1:26653457 Chy07g00809 Chy-Chr7:9995868 1.30E-13 dispersed
Chy07g00809 Chy-Chr7:9995868 Chy04g00636 Chy-Chr4:7251789 4.33E-55 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00809 - - csv:101221045 1314.29