Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy07g00856 | ATGGGTACAAGAACACAGCAACCATCCCGAGAAGACGACGATGACGACCTCCCAAGTGGCCCTGGTGCCACCACGATTTCGGGTCAGTCTGTTTCAATGAGTGGCAGTGTGGGTTCTCCTTCGAGTCGCAGCGAGCAAACCATGGCCACGCCTGCCAGCGACAACACTTTTCTTCGATTGAACAACCTCGACATCCATGGCGACGAGGCGGGTAATGTGAAGAAAAAGAGGGGTCAACGTGCTGTTGGAGGGGACAAGAGTGGAAGGGGGCTTCGCCAATTCAGCATGAAAGTTTGCGAGAAAGTGGAGAGTAAGGGAAGAACGACATATAACGAGGTTGCAGATGAACTTGTCGCAGAGTTTGCTGATCCTGGCAACAGTGTTGCATCACCAGATCAGCAGCAACAGTATGACGAAAAAAATATCAGGCGGAGGGTATATGATGCCCTGAATGTCCTCATGGCAATGGATATTATATCAAAGGATAAGAAGGAGATACAATGGAAGGGTCTTCCACGTACCAGCATGAATGATATTGAAGAACTAAAGGCGGAGCGTCTTGGACTTAGAAATAGGATTGAAAAGAAAGCAGCATACTTGCAAGAGTTGGAGGAACAGTATGTAGGTCTTCAGAACCTAATACAGCGAAATGAACAGTTATTCAATTCGGAGAATGCCCCCAGTGGTGGCGTGTCTTTGCCTTTCATCCTGGTGCAGACGAGGCCTCATGCCACTGTTGAGATAGAAATTTCAGAAGATATGCAGTTGGTCCATTTTGACTTCAACAGTACTCCTTTTGAGCTCCATGATGACAATTATGTTCTGAAGGCAATGAAATTTTGCAACAGACCTCAATGCGATAATACAGCACAAAATTTTACTCCTGATGGTGGGGAGGGTTCTAGCATGTCAGGCATGTACCAACCACCCCATATCCCTATTCCTTCATTGTCTAACACGCCGGTTAGAACGCCAACCTCACCACCACTTCCTGGAATCATAAAAGCTCGCGTCAAACACGAACATTAA | 1029 | 46.94 | MGTRTQQPSREDDDDDLPSGPGATTISGQSVSMSGSVGSPSSRSEQTMATPASDNTFLRLNNLDIHGDEAGNVKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPGNSVASPDQQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSMNDIEELKAERLGLRNRIEKKAAYLQELEEQYVGLQNLIQRNEQLFNSENAPSGGVSLPFILVQTRPHATVEIEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCNRPQCDNTAQNFTPDGGEGSSMSGMYQPPHIPIPSLSNTPVRTPTSPPLPGIIKARVKHEH* | 343 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 11257071 | 11261306 | + | Chy7G136860.1 | Chy07g00856 | 230867 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy07g00856 | 342 | Pfam | E2F/DP family winged-helix DNA-binding domain | 89 | 170 | IPR003316 | GO:0005667|GO:0006355 | |
Chy07g00856 | 342 | MobiDBLite | consensus disorder prediction | 68 | 89 | - | - | |
Chy07g00856 | 342 | Gene3D | Transcription factor DP | 176 | 298 | IPR038168 | - | |
Chy07g00856 | 342 | SUPERFAMILY | Winged helix DNA-binding domain | 89 | 171 | IPR036390 | - | |
Chy07g00856 | 342 | PANTHER | TRANSCRIPTION FACTOR DP | 22 | 342 | IPR015648 | GO:0005667|GO:0051726 | |
Chy07g00856 | 342 | SMART | E2F_TDP_2 | 86 | 170 | IPR003316 | GO:0005667|GO:0006355 | |
Chy07g00856 | 342 | MobiDBLite | consensus disorder prediction | 1 | 55 | - | - | |
Chy07g00856 | 342 | Coils | Coil | 186 | 220 | - | - | |
Chy07g00856 | 342 | MobiDBLite | consensus disorder prediction | 68 | 83 | - | - | |
Chy07g00856 | 342 | Pfam | Transcription factor DP | 178 | 285 | IPR014889 | - | |
Chy07g00856 | 342 | Gene3D | - | 82 | 175 | IPR036388 | - | |
Chy07g00856 | 342 | MobiDBLite | consensus disorder prediction | 22 | 55 | - | - | |
Chy07g00856 | 342 | PIRSF | Txn_factor_DP | 3 | 342 | IPR015648 | GO:0005667|GO:0051726 | |
Chy07g00856 | 342 | SMART | DP_2 | 177 | 340 | IPR014889 | - | |
Chy07g00856 | 342 | CDD | DP_DD | 175 | 278 | IPR014889 | - | |
Chy07g00856 | 342 | PANTHER | TRANSCRIPTION FACTOR DP | 22 | 342 | - | - | |
Chy07g00856 | 342 | SUPERFAMILY | E2F-DP heterodimerization region | 177 | 289 | IPR037241 | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18306 | PF08781 | DP | 2.60E-41 | No_clan | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy07g00856 | K04683 | - | csv:101216863 | 657.136 |