Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00856 ATGGGTACAAGAACACAGCAACCATCCCGAGAAGACGACGATGACGACCTCCCAAGTGGCCCTGGTGCCACCACGATTTCGGGTCAGTCTGTTTCAATGAGTGGCAGTGTGGGTTCTCCTTCGAGTCGCAGCGAGCAAACCATGGCCACGCCTGCCAGCGACAACACTTTTCTTCGATTGAACAACCTCGACATCCATGGCGACGAGGCGGGTAATGTGAAGAAAAAGAGGGGTCAACGTGCTGTTGGAGGGGACAAGAGTGGAAGGGGGCTTCGCCAATTCAGCATGAAAGTTTGCGAGAAAGTGGAGAGTAAGGGAAGAACGACATATAACGAGGTTGCAGATGAACTTGTCGCAGAGTTTGCTGATCCTGGCAACAGTGTTGCATCACCAGATCAGCAGCAACAGTATGACGAAAAAAATATCAGGCGGAGGGTATATGATGCCCTGAATGTCCTCATGGCAATGGATATTATATCAAAGGATAAGAAGGAGATACAATGGAAGGGTCTTCCACGTACCAGCATGAATGATATTGAAGAACTAAAGGCGGAGCGTCTTGGACTTAGAAATAGGATTGAAAAGAAAGCAGCATACTTGCAAGAGTTGGAGGAACAGTATGTAGGTCTTCAGAACCTAATACAGCGAAATGAACAGTTATTCAATTCGGAGAATGCCCCCAGTGGTGGCGTGTCTTTGCCTTTCATCCTGGTGCAGACGAGGCCTCATGCCACTGTTGAGATAGAAATTTCAGAAGATATGCAGTTGGTCCATTTTGACTTCAACAGTACTCCTTTTGAGCTCCATGATGACAATTATGTTCTGAAGGCAATGAAATTTTGCAACAGACCTCAATGCGATAATACAGCACAAAATTTTACTCCTGATGGTGGGGAGGGTTCTAGCATGTCAGGCATGTACCAACCACCCCATATCCCTATTCCTTCATTGTCTAACACGCCGGTTAGAACGCCAACCTCACCACCACTTCCTGGAATCATAAAAGCTCGCGTCAAACACGAACATTAA 1029 46.94 MGTRTQQPSREDDDDDLPSGPGATTISGQSVSMSGSVGSPSSRSEQTMATPASDNTFLRLNNLDIHGDEAGNVKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPGNSVASPDQQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSMNDIEELKAERLGLRNRIEKKAAYLQELEEQYVGLQNLIQRNEQLFNSENAPSGGVSLPFILVQTRPHATVEIEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCNRPQCDNTAQNFTPDGGEGSSMSGMYQPPHIPIPSLSNTPVRTPTSPPLPGIIKARVKHEH* 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11257071 11261306 + Chy7G136860.1 Chy07g00856 230867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00856 342 Pfam E2F/DP family winged-helix DNA-binding domain 89 170 IPR003316 GO:0005667|GO:0006355
Chy07g00856 342 MobiDBLite consensus disorder prediction 68 89 - -
Chy07g00856 342 Gene3D Transcription factor DP 176 298 IPR038168 -
Chy07g00856 342 SUPERFAMILY Winged helix DNA-binding domain 89 171 IPR036390 -
Chy07g00856 342 PANTHER TRANSCRIPTION FACTOR DP 22 342 IPR015648 GO:0005667|GO:0051726
Chy07g00856 342 SMART E2F_TDP_2 86 170 IPR003316 GO:0005667|GO:0006355
Chy07g00856 342 MobiDBLite consensus disorder prediction 1 55 - -
Chy07g00856 342 Coils Coil 186 220 - -
Chy07g00856 342 MobiDBLite consensus disorder prediction 68 83 - -
Chy07g00856 342 Pfam Transcription factor DP 178 285 IPR014889 -
Chy07g00856 342 Gene3D - 82 175 IPR036388 -
Chy07g00856 342 MobiDBLite consensus disorder prediction 22 55 - -
Chy07g00856 342 PIRSF Txn_factor_DP 3 342 IPR015648 GO:0005667|GO:0051726
Chy07g00856 342 SMART DP_2 177 340 IPR014889 -
Chy07g00856 342 CDD DP_DD 175 278 IPR014889 -
Chy07g00856 342 PANTHER TRANSCRIPTION FACTOR DP 22 342 - -
Chy07g00856 342 SUPERFAMILY E2F-DP heterodimerization region 177 289 IPR037241 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18306 PF08781 DP 2.60E-41 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00856 K04683 - csv:101216863 657.136