Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00877 ATGGGTTCCTCTTCCTCTTCTTTTTCAGTCATCAAATGGTTTTCTCTTACTAGACCCAAATCTCTAATTCTTCTCTCCAAGCTCTTTTTGCTGCTCTGCATCCTCTTCTTCTTTCAGACTCATGTTGTTTTCGGGGATTCCGACAAATCCGTGCTTCTTCAGTTCAAAAATGCTCTTTCCGACCCATCTGCTTTGCTTTCCTCCTGGATTCCCACTGATTCTAATTACTGCTTATGGTTTGGTGTTTCTTGCGACTTCAATTCACGGGTTGTCTCCCTCAACATTTCTGGGAATGGTGGTGTTTCAGGTAATCTTAATTCTTTTTCCTGTTCCGAGTCTTCTAAATTCCCTCTTTATGGACTTGGAATCAGAAGGGGCTGTGTGGGTAATAGAGGTTCACTCATTGGGAAGCTTCCACCCGTGATTGGGAACCTCACTCACCTCAGGGTTTTGTCTCTTCCGTTTCATGGTTTTCAAGGTGAGCTTCCTGGTGAAATCTTTGGATTGGAGAACCTTGAGGTTCTTGATCTAGAAGGGAATTCTGTAACTGGGCTGCTTCGTAATGATTTTTCCAGGTTGAGCAACTTGCGTGTTCTTAATCTTGCATTCAATAGGGTTACTGGTGAGATTCCTAGCTCGCTTTTGGGTTGTGCGAGTTTAGAGATCTTGAATTTAGCTGGGAATCAGTTGAATGGGACAATTCCAGAGTTTGTTGGTCAGATGAGAGGGGTCTACTTGTCTTTCAATTTTTTAACAGGATCCATTCCGAGTGAGCTTGGGAATAACTGTGGAAAGCTTGAGCATCTCGACCTGTCTGGTAATTTTTTGGTCAGTGGGATTCCAAGCAATCTGGGAAATTGCACTCAATTGCAGACATTGTTGCTATATTCTAATATGCTGGAAGAGGCCATTCCAGCAGGAATTGGTAAGTTGCAGAAGCTGGAAGTGCTTGATCTTTCAAGGAATAGTCTCAGTGGTCCGATACCCGTGGAGCTAGGAAATTGCTCGCAGTTGTCTGTCCTGGTGCTCTCGAATCTCTTTGATCCAATTCCCAAGATCAACTACACAGGCGATGACTCTCCAACTGAGGAACTTAGTGATGATAGTTTTAACTATTTTGCGGGTGGTATACCTGAGACAATAACAACCCTTCCAAAGCTGAGAATATTGTGGGCCCCTAGTGCAAACCTCAACGGCAGATTCCCTTCTCAATGGGGTCAGTGTGAAAGCTTGGAGATGATCAATTTAGGTGGTAATTATCTTTATGGGGAGCTTCCCAGTGGGTTTACCGGCTGCAAAAAGCTTCAAGTCCTTGATTTAAGCTCAAACCGGCTTTCTGGAGAACTTAATAAAAACCTACCAGTTCCTTACATGACTCTGTTTGATCTTAGCCATAACCAATTTTTTGGCGAGATTCCTTCGTTCTGTGGCAATGAATGCTCACAGGTGAAGTTCGGTTCGAATGGATATGTGAATTTTAACGATGCCTCGTCCCGGTATCTTTCATTTTTTGCCACTATTATTCGAGATGCAACCCCTTTTGAATTTGTTGGAAATGGTGATCTGATAATACATAACTTTGGGGACAATAACTTTACTGGAAATCTTCTGTCGTTGCCATTTCCACGTGAAAAACTGGGTAGTAAAACTGTTTATGCTTATCTTGTGGGTGGGAATAAGCTGACTGGACCATTTCCAGATAGTTTGTTTGAGAAATGCGACAATTTGGGGGGATTGATGTTTAATATTAGCAGCAATAAAATATCTGGCCCATTTTCTGTGACAATTGGTAAGAAGTGTGGTTCTCTCAAATTCTTGGATGTATCTGGTAATCAGATGATTGGGCAGGTACCTGCTAGCTTTGGAGAGCTATTATCTCTGAATCATCTGAACCTAAGTCGGAACAAGTTTCAGTATCAAATACCTACTTCTCTCGGACAGATGGCTAATTTGAAGTACCTTTGTTTGGCTGGCAATAACTTTAATGGTTCTATACCTCCAGCCTTGGGAAAGTTGCAGTCTTTGGAGTTGCTGGATCTTTCGTATAACGATCTTTCAGGTGAAATTCCAATGGATCTTGTTAACTTGAGAGGCCTAAAAGTTCTGCTGCTCAACAATAATTCACTCTCTGGACAGGTTCCCTCGGGTTTAGCTAATGTTACCACACTCTCTGCATTTAATGTGTCATTCAATAACTTGTCTGGTTCCCTGCCATCAAATAACAACATGATTAAATGTAGTGGTGCAATTGGAAACCCTTACCTGCGCCCGTGCCATATGTATTCTTTGGCTGTGCCTTCATCTGAAATGCAAGGTTCAGTTGGTGACCCAAGTGGTTTTGCAGCTTCACCGTCGGGTGTTGCACCCCAAACAAGTGGAGGTGGCAGCTTCAATTCCATTGAGATAGCATCCATCACATCTGCCTCTGCTATTGTTTCTGTTCTTATTGCTTTGATTATCCTATTTCTATATACACGAAAGTGGAACTCGAGATCTAAAGTTCTTGGGTCAATGAGAAAGGAAGTGACGGTTTTTACTGATATTGGGGTTTCCCTGACTTTTGAGAATGTGGGGCGTGCCAAGGAATTCTTCACGGCAGGGTTGTGGGAGGTAGGCCCCCATGATGATTTGGTTGAAGTATTACACTTAGCAGTTGTTTGTACAGTTGACTCTTTGTCGACTAGGCCGACGATGAAGCAAGTTGTACGACGGCTTAAGCAGCTTCAACCACCATCATGTTAG 2742 42.82 MGSSSSSFSVIKWFSLTRPKSLILLSKLFLLLCILFFFQTHVVFGDSDKSVLLQFKNALSDPSALLSSWIPTDSNYCLWFGVSCDFNSRVVSLNISGNGGVSGNLNSFSCSESSKFPLYGLGIRRGCVGNRGSLIGKLPPVIGNLTHLRVLSLPFHGFQGELPGEIFGLENLEVLDLEGNSVTGLLRNDFSRLSNLRVLNLAFNRVTGEIPSSLLGCASLEILNLAGNQLNGTIPEFVGQMRGVYLSFNFLTGSIPSELGNNCGKLEHLDLSGNFLVSGIPSNLGNCTQLQTLLLYSNMLEEAIPAGIGKLQKLEVLDLSRNSLSGPIPVELGNCSQLSVLVLSNLFDPIPKINYTGDDSPTEELSDDSFNYFAGGIPETITTLPKLRILWAPSANLNGRFPSQWGQCESLEMINLGGNYLYGELPSGFTGCKKLQVLDLSSNRLSGELNKNLPVPYMTLFDLSHNQFFGEIPSFCGNECSQVKFGSNGYVNFNDASSRYLSFFATIIRDATPFEFVGNGDLIIHNFGDNNFTGNLLSLPFPREKLGSKTVYAYLVGGNKLTGPFPDSLFEKCDNLGGLMFNISSNKISGPFSVTIGKKCGSLKFLDVSGNQMIGQVPASFGELLSLNHLNLSRNKFQYQIPTSLGQMANLKYLCLAGNNFNGSIPPALGKLQSLELLDLSYNDLSGEIPMDLVNLRGLKVLLLNNNSLSGQVPSGLANVTTLSAFNVSFNNLSGSLPSNNNMIKCSGAIGNPYLRPCHMYSLAVPSSEMQGSVGDPSGFAASPSGVAPQTSGGGSFNSIEIASITSASAIVSVLIALIILFLYTRKWNSRSKVLGSMRKEVTVFTDIGVSLTFENVGRAKEFFTAGLWEVGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPPSC* 914
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11996392 11999823 + Chy7G137070.1 Chy07g00877 230888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00877 913 Gene3D Ribonuclease Inhibitor 641 758 IPR032675 -
Chy07g00877 913 SUPERFAMILY L domain-like 47 346 - -
Chy07g00877 913 SMART LRR_typ_2 193 217 IPR003591 -
Chy07g00877 913 SMART LRR_typ_2 263 287 IPR003591 -
Chy07g00877 913 SMART LRR_typ_2 696 719 IPR003591 -
Chy07g00877 913 SMART LRR_typ_2 624 648 IPR003591 -
Chy07g00877 913 SMART LRR_typ_2 218 241 IPR003591 -
Chy07g00877 913 SMART LRR_typ_2 311 335 IPR003591 -
Chy07g00877 913 SMART LRR_typ_2 169 192 IPR003591 -
Chy07g00877 913 Pfam Leucine rich repeat 171 230 IPR001611 GO:0005515
Chy07g00877 913 Gene3D Ribonuclease Inhibitor 366 544 IPR032675 -
Chy07g00877 913 Gene3D Ribonuclease Inhibitor 242 365 IPR032675 -
Chy07g00877 913 Pfam Leucine Rich repeat 432 448 IPR001611 GO:0005515
Chy07g00877 913 SUPERFAMILY L domain-like 496 760 - -
Chy07g00877 913 PRINTS Leucine-rich repeat signature 435 448 - -
Chy07g00877 913 PRINTS Leucine-rich repeat signature 672 685 - -
Chy07g00877 913 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 25 857 - -
Chy07g00877 913 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 858 912 - -
Chy07g00877 913 Pfam Leucine Rich Repeat 313 335 IPR001611 GO:0005515
Chy07g00877 913 Pfam Leucine Rich Repeat 265 287 IPR001611 GO:0005515
Chy07g00877 913 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 858 912 - -
Chy07g00877 913 Pfam Leucine rich repeat N-terminal domain 46 85 IPR013210 -
Chy07g00877 913 Gene3D Ribonuclease Inhibitor 545 640 IPR032675 -
Chy07g00877 913 SUPERFAMILY L domain-like 309 482 - -
Chy07g00877 913 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 25 857 - -
Chy07g00877 913 Gene3D Ribonuclease Inhibitor 45 241 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00877 Chy-Chr7:11996392 Chy06g00397 Chy-Chr6:2692675 4.23E-77 dispersed
Chy07g00877 Chy-Chr7:11996392 Chy02g00590 Chy-Chr2:3585818 5.12E-65 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00877 - - csv:101218045 1613.59