Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy07g00958 | ATGGATTTGACTAGTGGCGATGATGGGAGGTATATTTGTTATGGATTTGACTTATTCTTAGATATGAATGAAGGCTACAGAAATAGTCTTCCCATTATTCTTTCTTGTGGTGGGTTGTCCTCCCACCACAAGGGTTGGGAAGGAATTGAGGTACACGTAAAGACGGGAAAATCCAATGGTTTCCCTGATGGAAAGAGTGAAGACCTAGCTGCAACTCGAATTCAAAATGCATTTCGTACATTTACGGCTAGAAAGGACGTACATAATTCGAAAGTGCCAGAGAGATGCCAGGATCTAGTTCAAGGTGAAACGGCTACAAAACAAGTGTCAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAGCACGTAGACTCTGTATGGTAACAGAATATCGAGTCAAGCAAAAGAAACTGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAGGCAGAATGGTCCGGTGGGTCAGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCAACGAGAAGAAGCTGCTGTAAGACGGGAGCGGGCTATGGCTTATGCATTCTCTCATCAGTGGAGGGCCAATTCCATCTTAGATCTGAGCGCGGCTTCATATAGTCTTGACAAAGAAAACTGGGGATGGAGCTGGAAGGAGAGATGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATAGTCATCCCACCATTCCAAAGAAGGTGCAAATGAAACAAACAAGCAAAGTCAATAAAGTGACGTATCAATCGGGGTTGAAGGTCTCCAACTTAGCTGGACATTCTTCGTTGAACAACAAGGCGAGTTCAAAGGCCAAAAATTCTGCTATATCCAACTGCTGA | 861 | 43.55 | MDLTSGDDGRYICYGFDLFLDMNEGYRNSLPIILSCGGLSSHHKGWEGIEVHVKTGKSNGFPDGKSEDLAATRIQNAFRTFTARKDVHNSKVPERCQDLVQGETATKQVSSFIHSWSRMQQEIRARRLCMVTEYRVKQKKLENQLKLEAKIHELEAEWSGGSETKEEILFKIQQREEAAVRRERAMAYAFSHQWRANSILDLSAASYSLDKENWGWSWKERWIAARPWEIRANSHPTIPKKVQMKQTSKVNKVTYQSGLKVSNLAGHSSLNNKASSKAKNSAISNC* | 287 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 14202843 | 14206977 | + | Chy7G137880.1 | Chy07g00958 | 230969 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy07g00958 | 286 | ProSiteProfiles | IQ motif profile. | 67 | 95 | IPR000048 | GO:0005515 | |
| Chy07g00958 | 286 | PANTHER | IQ-DOMAIN 5-RELATED | 52 | 278 | - | - | |
| Chy07g00958 | 286 | Coils | Coil | 137 | 157 | - | - | |
| Chy07g00958 | 286 | PANTHER | BINDING PROTEIN, PUTATIVE-RELATED | 52 | 278 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy01g00479 | Chy-Chr1:3462528 | Chy07g00958 | Chy-Chr7:14202843 | 3.43E-15 | dispersed | |
| Chy02g00253 | Chy-Chr2:1645222 | Chy07g00958 | Chy-Chr7:14202843 | 3.60E-70 | dispersed | |
| Chy07g00958 | Chy-Chr7:14202843 | Chy09g00721 | Chy-Chr9:9637359 | 7.68E-26 | dispersed | |
| Chy07g00958 | Chy-Chr7:14202843 | Chy10g01339 | Chy-Chr10:17688916 | 1.27E-32 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy07g00958 | - | - | csv:101206595 | 419.083 |