Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00996 ATGGCTGGTTGGCAAAGGAAACAATTTCTTCGAGCTCTACCTCCGGTCAGAGCTGGCGGTGACTTGTGGCGGCTGAGAGATTCGTCGGCTGCACAAACAATTGCAGTAGTTGAAGAGATTTCAAATATTCCGAACGTTCGGTTGTACTCATACAAAGAACTTAGAAAAGCAACTGAAAATTTCAGGTCTGAAAACAAACTTGGACAGGGAGGTTTTGGATCTGTCTACAAGGGAAGGCTTGGAAATGGAACTTTGGCAGCCATAAAGGTACTATCCATGGATTCAAGCCAAGGGACACGGGAATTTTTGGCAGAAATCAATGTGATCTCAGTTATAAATCATGATAACCTGGTTAAGTTGCATGGTTGTTGTGTGGAAGGGCAGCACCGGATCCTGGTCTATCCTTATCTAGAAAATAGCAGTCTTGACAAGATGCTTTTTGGTAGAGGACATAGGAATATTCAATTCAATTGGCAAACAAGGTGTAAAATATGCATTGGCGTTGCACAGGGGCTAGCATTCCTTCATGAGGAAGTTCAGCCGCATGTTATACACAGAGACATCAAGGCAAGCAATATCCTGCTTGATAAGGATTTAAACCCAAAAATTTCTGATTTTGGTCTTGCTAGACTACTCCCTGCTAACCTGACTCATGTTAGTACACGTGTTGCCGGGACAGTAGGTTATCTTGCACCTGAATTTGCCATACGGGGACAAGCGACAAGAAGAACAGATATTTATAGTTTTGGTGTCTTACTTTTGGAGATTGTTTGTGGGAGGTACAACATAAATAGACGGTTACCTGCTGAAGAACCGTATCTTCTTGAAATGGTGTGGGAGCATCATGAGAAAGGGCAATTGTTGGAATTGGTAGACATATCATTACGTAAAGACTTTGTGACAGAGCAGGCCTGTAGATACTTAAAAATCGGTCTTCTCTGCACCCAAGATATGCCAAAACTCCGGCCATCTATGGCTACTGTTGTCAAGATGCTAACGGGTGAAATTTATATATCTGATCAAACAATATCTAGACCAGGAATGCTTTCAGAGTTCATGCTTCGAAAAGATGTACTATGCAAGAAAGGTGAGTCAACAGCTGAAGACTCAGGAAAGCCAATTGATTCAACTTCATCATCAAGACACATGGACACCTCATATGCTACGATAACCTTCGATTCAATATTTGATCGTAGTAACTGA 1203 41.9 MAGWQRKQFLRALPPVRAGGDLWRLRDSSAAQTIAVVEEISNIPNVRLYSYKELRKATENFRSENKLGQGGFGSVYKGRLGNGTLAAIKVLSMDSSQGTREFLAEINVISVINHDNLVKLHGCCVEGQHRILVYPYLENSSLDKMLFGRGHRNIQFNWQTRCKICIGVAQGLAFLHEEVQPHVIHRDIKASNILLDKDLNPKISDFGLARLLPANLTHVSTRVAGTVGYLAPEFAIRGQATRRTDIYSFGVLLLEIVCGRYNINRRLPAEEPYLLEMVWEHHEKGQLLELVDISLRKDFVTEQACRYLKIGLLCTQDMPKLRPSMATVVKMLTGEIYISDQTISRPGMLSEFMLRKDVLCKKGESTAEDSGKPIDSTSSSRHMDTSYATITFDSIFDRSN* 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14682016 14687417 + Chy7G138260.1 Chy07g00996 231007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00996 400 ProSitePatterns Protein kinases ATP-binding region signature. 67 89 IPR017441 GO:0005524
Chy07g00996 400 SUPERFAMILY Protein kinase-like (PK-like) 39 332 IPR011009 -
Chy07g00996 400 SMART serkin_6 61 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00996 400 Pfam Protein kinase domain 62 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00996 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Chy07g00996 400 CDD STKc_IRAK 67 334 - -
Chy07g00996 400 Gene3D Phosphorylase Kinase; domain 1 32 136 - -
Chy07g00996 400 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 47 366 - -
Chy07g00996 400 ProSiteProfiles Protein kinase domain profile. 61 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00996 400 Gene3D Transferase(Phosphotransferase) domain 1 137 344 - -
Chy07g00996 400 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 47 366 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00996 Chy-Chr7:14682016 Chy10g00188 Chy-Chr10:4643757 3.70E-110 dispersed
Chy08g00826 Chy-Chr8:15795137 Chy07g00996 Chy-Chr7:14682016 4.02E-96 dispersed
Chy02g02189 Chy-Chr2:26071318 Chy07g00996 Chy-Chr7:14682016 4.20E-10 transposed
Chy04g02245 Chy-Chr4:27168290 Chy07g00996 Chy-Chr7:14682016 3.93E-104 transposed
Chy07g01051 Chy-Chr7:15447287 Chy07g00996 Chy-Chr7:14682016 5.97E-169 transposed
Chy12g00947 Chy-Chr12:14797602 Chy07g00996 Chy-Chr7:14682016 2.00E-110 transposed
Chy07g00003 Chy-Chr7:47337 Chy07g00996 Chy-Chr7:14682016 3.12E-100 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71384 PF00069 Pkinase 6.20E-45 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00996 - - csv:101213174 740.339