Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01000 ATGCCACAAGATCATCCAAAGAAGGAAGCCAAAGAAGTAAACTTTTTTACTGAATATGGGGATGCTAACAGATATAAGATTCTTGAAGTTGTTGGAAAGGGAAGTTATGGAGTTGTTTGTTCTGCTATTGACATGCAAACTGGGGAGAAAGTTGCAATAAAGAGAATTCATGATATTTTTGATCATGCATCTGATGCTATTCGAATCCTTCGTGAAGTTAAGTTGCTTAGACTGTTGCGGCATCCTGATATTGTTGACATCAAGCGTATTATGTTACCACCTTCTAAAAAGGAATTTAGGGACATTTATGTGGTTTTTGAGCTTATGGAATCTGATCTTCATCAAGTTATTAAAGCAAATGATGACTTGACGCGTGAACATCATCAATTCTTTCTCTATCAAATGCTACGTGCATTGAAATTCATGCATACAGCGAATGTGTATCATAGAGATCTGAAGCCAAAGAATATATTAGCAAATGCCAATTGCAAGCTTAAAATTTGTGATTTTGGACTTGCAAGAGTTGCTTTCAGTGATACCCCAACTACTGTATTTTGGACAGACTATGTTGCTACTAGATGGTACAGAGCTCCGGAGTTGTGTGGATCATTCTGTTCCAAGTATACTCCTGCTATAGATATTTGGAGTGTTGGCTGCATATTTGCTGAGGTTTTGATGGGGAAGCCACTGTTTCCGGGTAAAAGTGTTGCACATCAGTTGGATTTGATTACTGATCTTCTTGGGACCCCCTCATTGGAAACCATTGCAGGAGTTCGAAATGAAAAGGTCAGAAAATATTTGACAGAAATGAAAAAGAAATCTCCAGTGCCATTTTCACAAAGATTTCCCAAGGCAGATCCTACAGCCATCCGCTTATTGGAAAGACTATTAGCATTTAATCCAAAGGATCGACCATCTGCTGTGGAGGCTCTGGCTGATCCTTACTTTAAAGGCCTTGCCAAAGTTGAAAGAGAGCCTTCTTGTCAGCCAATCTCAAGATCGGAATTTGAGTTTGAGAGACGGAAATTAACAAAGGATGATGTTAGGGAATTGTTGTACAGAGAAATATTGGAATATCATCCTCAAATTCGTGACGATTATTTGAATGGAACTGAGACTACAAAGCTACACTATCCTAGTGTTACAGTTCATTTTAAAAGCCAATTCACCTTCCACAAGGAGAACAATGGTAAAAGCGCGCCTGTTTTACCACTAGAACGGAAACACTTCTCACTGCCACGGTCCACTGTTTGCACAAATTTGGTTTCACCTGATCATGAACCCGTTCGGCGAAATCCCAAAGTTTGTAATAATAGTATGGGATTACCAGATAGAACATTTGGGAATCCATCAAAGGCTCATCATCCACCTAAAGTGCCTACTGTATGGTTTGTATCGGTATTATTACTACACCGAGGAATTCACCAAAGTCACAGAAATGGGGGATTTGAATATCACCAATTAGAATTAGAGGCGGCAGTAGCTGGCTTCAGCTCCACCACTAAACTCCGAAGAAGCTGTAGATTTGTCGCCTACTTACAAGGCGCTTAG 1551 39.78 MPQDHPKKEAKEVNFFTEYGDANRYKILEVVGKGSYGVVCSAIDMQTGEKVAIKRIHDIFDHASDAIRILREVKLLRLLRHPDIVDIKRIMLPPSKKEFRDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKFMHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFCSKYTPAIDIWSVGCIFAEVLMGKPLFPGKSVAHQLDLITDLLGTPSLETIAGVRNEKVRKYLTEMKKKSPVPFSQRFPKADPTAIRLLERLLAFNPKDRPSAVEALADPYFKGLAKVEREPSCQPISRSEFEFERRKLTKDDVRELLYREILEYHPQIRDDYLNGTETTKLHYPSVTVHFKSQFTFHKENNGKSAPVLPLERKHFSLPRSTVCTNLVSPDHEPVRRNPKVCNNSMGLPDRTFGNPSKAHHPPKVPTVWFVSVLLLHRGIHQSHRNGGFEYHQLELEAAVAGFSSTTKLRRSCRFVAYLQGA* 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14709450 14714753 + Chy7G138300.1 Chy07g01000 231011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01000 516 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g01000 516 SUPERFAMILY Protein kinase-like (PK-like) 20 320 IPR011009 -
Chy07g01000 516 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 10 441 - -
Chy07g01000 516 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Chy07g01000 516 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 441 - -
Chy07g01000 516 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g01000 516 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g01000 516 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Chy07g01000 516 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Chy07g01000 516 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Chy07g01000 516 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01000 Chy-Chr7:14709450 Chy11g01004 Chy-Chr11:14174479 0 dispersed
Chy09g00615 Chy-Chr9:7558028 Chy07g01000 Chy-Chr7:14709450 1.09E-21 dispersed
Chy12g01600 Chy-Chr12:19550025 Chy07g01000 Chy-Chr7:14709450 3.65E-30 dispersed
Chy07g01000 Chy-Chr7:14709450 Chy02g02318 Chy-Chr2:27194904 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71385 PF00069 Pkinase 1.00E-64 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01000 - K04371 csv:101213897 942.184