Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01042 ATGGCGGACCAAGTAAAGTTGTTGGATTTTTGGCCCAGCATGTTCGGGATGCGAGTCAGAGTAGCCCTTGCTCTCAAGTGCGTGCCCTACGAATATGTGGATGAAGATCTCACAAACAAGAGCCCTTTGCTTCTTCAAATGAACCCAATTCACAAGAAAATCCCTGTTCTTATTCATAATGGAAAGCCCATTTGTGAATCTTCCATAATCGTCCAGTATATTGATGAATTTTGGAAGGATAAAGCTCCTCTGTTTCCGACTCATCCTTATGACAGAGCTCAGGCCAGATTTTGGGTTGATTTCATCGATAAGAAGCTTTTTGATTGTGGGAGGAAAATTTGGGCTAGCAAAGGAGATGAGCAAGAAGAAGGTAAAACGGAGGTAATAGGAATATTGAAGCAGCTTGAAGAAGTAATCGGGGAGAAGGCTTACTTTGGAGGTGAAAGTTTGGGATTTGTAGACATAGTTTTGATTGGATATTACACTTGGTTTTATGCCTATGAGACCATTGGAAACTTCAGCATTGAGTCTGAGTGTCCAAAGATAATGAGTTGGGCAAAGAGATGCTTACAAAATGAGAGTGTTTCCGAGACCCTACCTGACCCGAAAAAGGTTTGTGATTTTGTGCTTCAAATGAAGAAAAAGTATGGGCTTTGA 657 41.25 MADQVKLLDFWPSMFGMRVRVALALKCVPYEYVDEDLTNKSPLLLQMNPIHKKIPVLIHNGKPICESSIIVQYIDEFWKDKAPLFPTHPYDRAQARFWVDFIDKKLFDCGRKIWASKGDEQEEGKTEVIGILKQLEEVIGEKAYFGGESLGFVDIVLIGYYTWFYAYETIGNFSIESECPKIMSWAKRCLQNESVSETLPDPKKVCDFVLQMKKKYGL* 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15362524 15363803 + Chy7G138720.1 Chy07g01042 231053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01042 218 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Chy07g01042 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Chy07g01042 218 PANTHER GLUTATHIONE S-TRANSFERASE PARC-RELATED 4 210 - -
Chy07g01042 218 CDD GST_N_Tau 5 78 - -
Chy07g01042 218 Gene3D Glutaredoxin 1 87 - -
Chy07g01042 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 210 IPR045073 -
Chy07g01042 218 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Chy07g01042 218 SUPERFAMILY Thioredoxin-like 4 106 IPR036249 -
Chy07g01042 218 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Chy07g01042 218 Pfam Glutathione S-transferase, C-terminal domain 115 191 IPR004046 -
Chy07g01042 218 Gene3D - 88 218 - -
Chy07g01042 218 SFLD Glutathione Transferase (cytosolic) 2 216 IPR040079 -
Chy07g01042 218 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Chy07g01042 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01035 Chy-Chr7:15318582 Chy07g01042 Chy-Chr7:15362524 8.29E-128 dispersed
Chy07g01038 Chy-Chr7:15329299 Chy07g01042 Chy-Chr7:15362524 3.25E-126 dispersed
Chy07g01039 Chy-Chr7:15331807 Chy07g01042 Chy-Chr7:15362524 1.49E-114 dispersed
Chy07g01042 Chy-Chr7:15362524 Chy06g00410 Chy-Chr6:2764519 1.95E-54 dispersed
Chy07g01042 Chy-Chr7:15362524 Chy07g01043 Chy-Chr7:15369291 2.64E-41 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01042 K00799 - csv:101217848 452.21