Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01043 ATGTACACGAAACAGGGGGAGGAGCAAGAGGGAGGGAAGAAGGAGGTGATAGAAATACTGAAGCAACTGGACCAAGTCCTTGGGGAAAAGGCTTATTTTGGAGGTGAATGTTTTGGATATTTAGACATTGGTTTGATTGGATTCTCTTCATGGTTTTATGCATATGAGACAATTGGGAACTTCAGCATTGAGGGTGAGTGTCCAAAGTTAATAAGTTGGGTGAAAAGATGTTTGGAAAAGGAGAGTGTTTCTAATTCCCTGCCTGACCCCAAAAAGATGTTGATTGGGGTTCTTGCCCAGACTCGAGGAAGTCTGTCTCTGGTTTCTCTAATAAGTTGGAAAGCCAAGAAACAATCCATCCTCTCTAGATCATCAGCAAAGGCCGAATACAGGGCTTTAGCTGCAACAACTATTGAAATTTTGTGGATTGGACAACTACTTAAAGACCTTGTTTATTCCACTTACATGTATAATAATTACACCATAATGAGCAAGTTAGAGGAGTTGGTTTTGTTAGACTTGTGGCTGAGCCCTTTTGCAATAAGAGTGAGGTCGACTTTGGCAGAGAAAGGCCTAAAATATGAAGCAAAAGAGGAAGATTTGAGCAACAAAAGCCCTTTGCTTTTGGAAATGAATCCTATTTACAAGCAAATCCCTGTTTTGATTCACAAAGGGAAACCCATTATTGATTCTTCTCTCATTGTTGAATATATTGATGAGATTTGGAGTAGTGATGATGACAAAACGTATACTAATTTGCTTCCTTCTCATCCTCTTGAGAGAGCCCATGCTAGGTTCTGGGTTGACTATGTGGACAAAAAGATTTATCCCATTGGAAGTAAGCTATGGAATAGACATAAAACAGAAGAGGAGAAAGAAGCAGCAGCGAAGGAATTGTTGGAGTGCTTTAAGCAGCTACAAGAAGAGCTTGGAGATAAAGACTATTTTGGTGGCCAAACATTTGGGTTTATAGATATTGCTCTCATTCCATTTTACAGCATGAAGGAATTGCAGCCCCAACCATATTTGGGTGTTGGGATTATGTCTCACAAGAAAAAATAA 1062 39.64 MYTKQGEEQEGGKKEVIEILKQLDQVLGEKAYFGGECFGYLDIGLIGFSSWFYAYETIGNFSIEGECPKLISWVKRCLEKESVSNSLPDPKKMLIGVLAQTRGSLSLVSLISWKAKKQSILSRSSAKAEYRALAATTIEILWIGQLLKDLVYSTYMYNNYTIMSKLEELVLLDLWLSPFAIRVRSTLAEKGLKYEAKEEDLSNKSPLLLEMNPIYKQIPVLIHKGKPIIDSSLIVEYIDEIWSSDDDKTYTNLLPSHPLERAHARFWVDYVDKKIYPIGSKLWNRHKTEEEKEAAAKELLECFKQLQEELGDKDYFGGQTFGFIDIALIPFYSMKELQPQPYLGVGIMSHKKK* 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15369291 15376043 + Chy7G138730.1 Chy07g01043 231054

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01043 353 Gene3D - 256 345 - -
Chy07g01043 353 CDD GST_N_Tau 169 242 - -
Chy07g01043 353 SUPERFAMILY Thioredoxin-like 169 276 IPR036249 -
Chy07g01043 353 CDD GST_C_Tau 258 334 IPR045074 GO:0004364|GO:0006749
Chy07g01043 353 SFLD Main.3: Omega- and Tau-like 167 335 IPR045073 -
Chy07g01043 353 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 167 246 IPR004045 -
Chy07g01043 353 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 257 353 IPR010987 -
Chy07g01043 353 SUPERFAMILY GST C-terminal domain-like 251 335 IPR036282 -
Chy07g01043 353 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 94 IPR010987 -
Chy07g01043 353 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 168 334 - -
Chy07g01043 353 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 2 98 - -
Chy07g01043 353 Gene3D Glutaredoxin 165 255 - -
Chy07g01043 353 SFLD Main (cytGST) 167 335 - -
Chy07g01043 353 CDD GST_C_Tau 3 94 IPR045074 GO:0004364|GO:0006749
Chy07g01043 353 Pfam Glutathione S-transferase, N-terminal domain 169 240 IPR004045 -
Chy07g01043 353 SUPERFAMILY GST C-terminal domain-like 5 94 IPR036282 -
Chy07g01043 353 Coils Coil 289 309 - -
Chy07g01043 353 Gene3D - 1 103 - -
Chy07g01043 353 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 168 334 IPR045073 -
Chy07g01043 353 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 2 98 IPR045073 -
Chy07g01043 353 Pfam Glutathione S-transferase, C-terminal domain 290 332 - -
Chy07g01043 353 Pfam Glutathione S-transferase, C-terminal domain 12 76 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01043 K00799 GST, gst; glutathione S-transferase [EC:2.5.1.18] - oeu:111389263 212.231
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01043 Chy-Chr7:15369291 Chy06g00411 Chy-Chr6:2765740 3.27E-19 dispersed
Chy07g01042 Chy-Chr7:15362524 Chy07g01043 Chy-Chr7:15369291 2.64E-41 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g927 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo10g00705 . . . . . . . . . Cma04g00640 . . . . . . . . . . . . . . . . . . . . . Chy07g01043 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Chy01g01668 . 1 209 Glutathione S-transferase Gene Family AT4G02520 56.6 1.9e-63 239.2
Chy01g01670 . 1 210 Glutathione S-transferase Gene Family AT4G02520 58.2 2.5e-63 238.8
Chy01g01670 . 1 211 Glutathione S-transferase Gene Family AT2G02930 59.1 1.7e-64 242.7
Chy01g01668 . 1 210 Glutathione S-transferase Gene Family AT2G02930 57.3 5.0e-64 241.1
Chy01g01669 . 3 146 Glutathione S-transferase Gene Family AT2G02930 56.5 2.3e-37 152.5
Chy01g01668 . 5 206 Glutathione S-transferase Gene Family AT1G02950 52.7 4.5e-59 224.9
Chy01g01670 . 6 215 Glutathione S-transferase Gene Family AT1G02950 52.6 1.1e-57 220.3
Chy01g01670 . 1 211 Glutathione S-transferase Gene Family AT1G02930 57.8 9.2e-63 236.9
Chy01g01668 . 1 210 Glutathione S-transferase Gene Family AT1G02930 54.8 2.7e-62 235.3
Chy01g01669 . 3 146 Glutathione S-transferase Gene Family AT1G02930 56.3 8.7e-37 150.6
Chy01g01670 . 1 211 Glutathione S-transferase Gene Family AT1G02920 59.2 2.9e-64 241.9
Chy01g01668 . 1 210 Glutathione S-transferase Gene Family AT1G02920 55.2 2.4e-63 238.8
Chy01g01669 . 3 146 Glutathione S-transferase Gene Family AT1G02920 57.6 5.5e-39 157.9
Chy01g01668 . 1 215 Glutathione S-transferase Gene Family AT2G47730 58.3 5.4e-68 254.6
Chy01g01670 . 4 215 Glutathione S-transferase Gene Family AT2G47730 57.3 9.5e-65 243.8
Chy01g01669 . 3 150 Glutathione S-transferase Gene Family AT2G47730 51.0 8.4e-37 151.0
Chy01g01670 . 20 215 Glutathione S-transferase Gene Family AT1G49860 51.0 4.6e-48 188.3
Chy08g00693 . 1 209 Glutathione S-transferase Gene Family AT2G29450 50.5 7.4e-50 194.1
Chy08g00693 . 5 221 Glutathione S-transferase Gene Family AT3G09270 54.8 9.0e-64 240.4
Chy08g00692 . 4 225 Glutathione S-transferase Gene Family AT3G09270 51.1 9.9e-63 236.9
Chy08g00690 . 3 215 Glutathione S-transferase Gene Family AT3G09270 51.6 1.3e-62 236.5
Chy08g00694 . 4 216 Glutathione S-transferase Gene Family AT3G09270 51.2 4.2e-61 231.5
Chy08g00695 . 2 216 Glutathione S-transferase Gene Family AT3G09270 52.3 5.5e-61 231.1
Chy08g00682 . 1 218 Glutathione S-transferase Gene Family AT3G09270 53.0 7.9e-60 227.3
Chy08g00685 . 3 218 Glutathione S-transferase Gene Family AT3G09270 50.2 2.5e-58 222.2
Chy06g00270 . 2 214 Glutathione S-transferase Gene Family AT3G09270 50.2 1.6e-57 219.5
Chy07g01035 . 4 214 Glutathione S-transferase Gene Family AT1G78380 69.8 2.6e-84 308.5
Chy07g01042 . 1 216 Glutathione S-transferase Gene Family AT1G78380 66.2 2.6e-84 308.5
Chy07g01038 . 1 217 Glutathione S-transferase Gene Family AT1G78380 67.7 7.7e-84 307.0
Chy07g01039 . 1 216 Glutathione S-transferase Gene Family AT1G78380 64.5 6.7e-80 293.9
Chy07g01043 . 167 333 Glutathione S-transferase Gene Family AT1G78380 53.3 4.4e-47 184.9
Chy07g01042 . 1 214 Glutathione S-transferase Gene Family AT1G78370 60.7 5.8e-76 280.8
Chy07g01035 . 8 214 Glutathione S-transferase Gene Family AT1G78370 62.5 7.6e-76 280.4
Chy07g01039 . 7 213 Glutathione S-transferase Gene Family AT1G78370 63.9 2.2e-75 278.9
Chy07g01038 . 7 216 Glutathione S-transferase Gene Family AT1G78370 58.6 3.5e-73 271.6
Chy07g01043 . 170 333 Glutathione S-transferase Gene Family AT1G78370 51.8 5.0e-43 171.4
Chy07g01035 . 1 214 Glutathione S-transferase Gene Family AT1G78340 65.1 7.4e-79 290.4
Chy07g01042 . 1 216 Glutathione S-transferase Gene Family AT1G78340 61.6 1.8e-77 285.8
Chy07g01038 . 1 217 Glutathione S-transferase Gene Family AT1G78340 59.9 8.4e-75 276.9
Chy07g01039 . 1 213 Glutathione S-transferase Gene Family AT1G78340 59.8 1.2e-73 273.1
Chy07g01043 . 167 333 Glutathione S-transferase Gene Family AT1G78340 53.3 6.1e-49 191.0
Chy07g01035 . 3 218 Glutathione S-transferase Gene Family AT1G78320 53.7 2.0e-59 225.7
Chy07g01038 . 1 221 Glutathione S-transferase Gene Family AT1G78320 50.5 3.2e-57 218.4
Chy07g01035 . 1 218 Glutathione S-transferase Gene Family AT1G17180 70.8 1.4e-88 322.8
Chy07g01038 . 1 220 Glutathione S-transferase Gene Family AT1G17180 63.6 1.9e-82 302.4
Chy07g01042 . 1 218 Glutathione S-transferase Gene Family AT1G17180 61.0 7.2e-82 300.4
Chy07g01039 . 1 215 Glutathione S-transferase Gene Family AT1G17180 64.4 2.1e-81 298.9
Chy07g01043 . 167 333 Glutathione S-transferase Gene Family AT1G17180 53.3 1.8e-48 189.5
Chy07g01035 . 1 217 Glutathione S-transferase Gene Family AT1G17190 60.6 2.0e-76 282.3
Chy07g01042 . 3 217 Glutathione S-transferase Gene Family AT1G17190 54.4 6.3e-70 260.8
Chy07g01038 . 2 218 Glutathione S-transferase Gene Family AT1G17190 55.3 1.1e-69 260.0
Chy07g01039 . 2 214 Glutathione S-transferase Gene Family AT1G17190 57.0 4.1e-69 258.1
Chy07g01043 . 167 333 Glutathione S-transferase Gene Family AT1G17190 52.1 7.0e-45 177.6
Chy07g01042 . 3 214 Glutathione S-transferase Gene Family AT3G43800 55.1 1.2e-68 256.5
Chy07g01038 . 3 212 Glutathione S-transferase Gene Family AT3G43800 53.5 2.7e-68 255.4
Chy07g01035 . 1 214 Glutathione S-transferase Gene Family AT3G43800 53.4 2.0e-66 249.2
Chy07g01035 . 3 218 Glutathione S-transferase Gene Family AT1G53680 55.7 3.0e-67 251.9
Chy07g01038 . 1 221 Glutathione S-transferase Gene Family AT1G53680 54.4 1.5e-66 249.6
Chy07g01042 . 4 218 Glutathione S-transferase Gene Family AT1G53680 54.4 4.8e-65 244.6
Chy07g01039 . 2 213 Glutathione S-transferase Gene Family AT1G53680 55.3 1.5e-63 239.6
Chy07g01043 . 168 333 Glutathione S-transferase Gene Family AT1G53680 52.1 3.0e-43 172.2
Chy11g00032 . 36 207 Glutathione S-transferase Gene Family AT2G02390 67.4 6.8e-60 227.3
Chy11g00028 . 50 218 Glutathione S-transferase Gene Family AT2G02390 63.9 3.1e-57 218.4
Chy11g00028 . 6 218 Glutathione S-transferase Gene Family AT2G02380 58.2 1.9e-69 259.2
Chy11g00032 . 14 205 Glutathione S-transferase Gene Family AT2G02380 61.7 8.4e-62 233.8
Chy06g00242 . 700 879 Glutathione S-transferase Gene Family AT2G02380 50.6 2.0e-47 186.0
Chy07g01212 . 1 237 Glutathione S-transferase Gene Family AT5G41210 69.2 2.4e-94 342.0
Chy07g01212 . 1 237 Glutathione S-transferase Gene Family AT5G41240 67.1 7.8e-91 331.6
Chy04g02105 . 9 235 Glutathione S-transferase Gene Family AT5G02780 67.5 4.0e-86 314.7
Chy10g00609 . 75 294 Glutathione S-transferase Gene Family AT5G02780 64.9 7.3e-80 293.9
Chy04g02103 . 13 143 Glutathione S-transferase Gene Family AT5G02780 69.7 5.1e-49 191.4
Chy10g00609 . 17 292 Glutathione S-transferase Gene Family AT3G55040 60.3 5.8e-87 317.8
Chy04g02105 . 6 236 Glutathione S-transferase Gene Family AT3G55040 59.3 2.4e-77 285.8
Chy04g02103 . 3 144 Glutathione S-transferase Gene Family AT3G55040 59.9 2.9e-46 182.6
Chy04g02105 . 1 235 Glutathione S-transferase Gene Family AT5G02790 68.1 1.7e-92 335.9
Chy10g00609 . 67 294 Glutathione S-transferase Gene Family AT5G02790 62.0 7.7e-82 300.4
Chy04g02103 . 7 148 Glutathione S-transferase Gene Family AT5G02790 69.0 1.4e-54 209.9
Chy10g00583 . 1 212 Glutathione S-transferase Gene Family AT1G19570 66.7 3.5e-81 298.1
Chy06g01363 . 6 213 Glutathione S-transferase Gene Family AT1G19570 60.8 5.9e-73 270.8
Chy10g00583 . 1 211 Glutathione S-transferase Gene Family AT1G75270 71.7 6.1e-86 313.9
Chy06g01363 . 6 213 Glutathione S-transferase Gene Family AT1G75270 62.7 1.4e-74 276.2
Chy06g01363 . 2 216 Glutathione S-transferase Gene Family AT5G16710 78.1 1.2e-99 359.8
Chy10g00583 . 3 210 Glutathione S-transferase Gene Family AT5G16710 61.1 5.9e-75 277.7
Chy07g00602 . 1 268 Glutathione S-transferase Gene Family AT1G77290 69.4 5.4e-108 387.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000291 5 5 16 3 3 4 0 3 4 5 2 4 5 4 5 5 4 4 3 4 3 8 4 5 5 8 2 4 1 17 145
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy07g01043 Chy_Chr07 FPKM 15.407262 17.447891 15.861438 16.27179 30.078407 24.056631 31.426987 31.774216 30.482639 30.162395