Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01051 ATGAAGTTGATCTCGAATTTGGAAGTGAATTCTGGGTTCAGGAAACTCAGAAGTAAGAGGGTAAAACCCCCAACAAGTAGTTCGGTCGACGAAGAAGATTTTGCTGGCATGCAAAATGTTAAATTTTACACATACAAAGAGCTAAAAGTTGCAACCGAAGATTTCAGCTTGGCGAATAAAATAGGGGAGGGTGGTTTTGGTTCTGTCTACAAGGGGAAGCTAAAAGATGGAAAGCTTGCTGCCATAAAAGTTCTTTCGGCTGAGTCAAGACAAGGATTGAGGGAATTCTTGACAGAAATTAATGTCATCTCTGAGATAGAACATGAAAATCTGGTTCAGCTTTATGGGTGCTGTGTGGACGATAATCATAGAATTCTTGTCTACAATTACCTTGAGAACAATAGCCTTGCACAAACTCTTCTTGGACGAGGTTACAGTAGCATCCAGTTTAATTGGCGAACAAGGTCTAAGATTTGCATTGGAATTGCACGTGGGCTTGCCTTCCTTCACGAGGATGTACAGCCACATATTATACATAGAGATATCAAAGCAAGCAACATTCTTCTCGATCACGACCTCTCTCCTAAAATTTCCGATTTTGGTCTCGCAAAACTTATTCCAGCCAGCATGACTCACGTCAGTACACGAGTGGCAGGAACAATTGGTTACCTAGCTCCAGAATACGCGATAAGAGGGCAGGTGACAAGAAAATCAGACATTTACAGTTTTGGAGTCTTGCTTGTGGAAATAGTCAGCGGAAGATGGAACACGAATACACAATTACCAATTGGAGAACAATATCTTCTTGAAAGGACATGGAATCTATATGAACAAGGAGAGCTCGTTCTCCTAGTTGATACGTCCTTAAACGGGGACTTCGATGCTGAGGTGGCCTGTAAATATCTAAAGATTGGCCTACTTTGCACGCAAGACAGTCCAAAACTCCGTCCATCCATGTCGACTGTGGTAAAGATGCTAACCGGCGAGATGAGTGTCGAAGACAGAAAGATAACGAAACCGGGGCTGATTTCGGACTTCATGGATCTAAAAGTAAAGATTCCAGAGGAAAAGAAAGGGAACAGAGAGGGGATGTCTTCTGATAGTCTGTCCTCAGGATCAAACACCCTTGGAAATTCAACATTGTCATCTGAAGCCTCAACTGTTACAACAGGAACCTTCACTGCACAATATGACAGGAATACTTTCTCATCTGCACTGTGA 1221 42.42 MKLISNLEVNSGFRKLRSKRVKPPTSSSVDEEDFAGMQNVKFYTYKELKVATEDFSLANKIGEGGFGSVYKGKLKDGKLAAIKVLSAESRQGLREFLTEINVISEIEHENLVQLYGCCVDDNHRILVYNYLENNSLAQTLLGRGYSSIQFNWRTRSKICIGIARGLAFLHEDVQPHIIHRDIKASNILLDHDLSPKISDFGLAKLIPASMTHVSTRVAGTIGYLAPEYAIRGQVTRKSDIYSFGVLLVEIVSGRWNTNTQLPIGEQYLLERTWNLYEQGELVLLVDTSLNGDFDAEVACKYLKIGLLCTQDSPKLRPSMSTVVKMLTGEMSVEDRKITKPGLISDFMDLKVKIPEEKKGNREGMSSDSLSSGSNTLGNSTLSSEASTVTTGTFTAQYDRNTFSSAL* 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15447287 15450615 - Chy7G138810.1 Chy07g01051 231062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01051 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Chy07g01051 406 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 21 386 - -
Chy07g01051 406 SUPERFAMILY Protein kinase-like (PK-like) 37 326 IPR011009 -
Chy07g01051 406 Pfam Protein kinase domain 57 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g01051 406 ProSiteProfiles Protein kinase domain profile. 55 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g01051 406 ProSitePatterns Protein kinases ATP-binding region signature. 61 83 IPR017441 GO:0005524
Chy07g01051 406 MobiDBLite consensus disorder prediction 354 383 - -
Chy07g01051 406 CDD STKc_IRAK 61 328 - -
Chy07g01051 406 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 21 386 - -
Chy07g01051 406 Gene3D Transferase(Phosphotransferase) domain 1 131 340 - -
Chy07g01051 406 SMART serkin_6 55 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g01051 406 MobiDBLite consensus disorder prediction 364 383 - -
Chy07g01051 406 Gene3D Phosphorylase Kinase; domain 1 26 130 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01051 Chy-Chr7:15447287 Chy12g00947 Chy-Chr12:14797602 8.03E-117 dispersed
Chy12g00049 Chy-Chr12:443043 Chy07g01051 Chy-Chr7:15447287 8.70E-103 dispersed
Chy07g01051 Chy-Chr7:15447287 Chy07g00996 Chy-Chr7:14682016 5.97E-169 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71387 PF00069 Pkinase 3.60E-47 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01051 - - csv:101216433 729.554