Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01059 ATGATCTCCCCATTTTGTTGCATAATTCATCCAGGCTTTACAAACAATAATCCAAGAAACAACGATAAATTCATCAATGGCCTTCTTCCTCCAGACTTCGATAAAAAATCCTGCTTAAGCCGATACCAACTCAACCTCCACAGAAAACCCTCTCCCCACAAACCCTCTTTCCCTCTCCTCTCAAAGCTCCGTCGCTACGAGGCTCTCCACCGTCGCTGTGCCCCCAATTCCCCATCGTTCCGTCAAGCCCTTCTTCGTCTCACCTCACCCACCAACTCCACAACCCCATCACATCATGACTGCAAATACATTGTTATTCTTACTCGAGACGGCCTCGGCAATCGGATCCTCGCCATTCTCTCTGCCTTCTTCTACGCTCTAATCTCCAATCGTGTCATTCTAATCGATCCTGGCAATACCCTCGAAGATCTCTTCTGTGAGCCCTTTCTTGAATCCTCATGGCTTCTTCCCTCAGATTTCCCTCTCCGGAACAAATTTGGGTCATTCCGTCAGTCCTTCCCCGAGTCTTTTGGGAATATTTTGAGGAATGGGATGCGGAAGAAAACACTCGAAGATTCACGGCCTCCACCTTATTTGTATCTCCACCTCTCTCATGATGCCGATGATTACGATAAGCTCTTTTACTGTGATCGACAACAAAATCTTTTGAAGAAGGTTCCATGGTTGATTATGGAGACGAATAACTACCTGGTTCCGGGAATTTTTTTGGTTTCTTCTTTTAGACAAGAGCTTAACGAACTCTTTCCGGCGAAGGACACTGTGTTCCACCATCTTGGACGATACCTCTTCCACCCGACGAACGATGTGTGGGGGCTGATTTTGAGATCTTACAAGCCATATGTTGCCAGAGCGAATGAAATGGTGGGGATTCAGGTCCGAATTTTTGGATCGGAGTCCGGGTCGATTCAGGACCAAATCAATCAGATTCTAGCTTGTACACAGAAGAAGAAATTACTACCGGAGACCGAACCATCGTCGCCAGAGAAGACGAATTTCTCCACTTCTCAGAAAGTGAAAGTTGTGTTGGTGACGTCTCTCAACTCTCAATACTCTGAAACCCTGAAGGAGATGTATTGGGAGCATCCGACTGTCGACGGGGAGGTGGTGGCGGTGTACCAGCCAAGCCACGAGGGGGTTCAGAGCTCGGATAATAGGATACACAATCGGAAGGCACTGGCGGAAATGTACCTTTTGAGTTTGAGCGACGTGTTGGTGACGAGCGATTGGTCGACGTTTGGATATGTGGCACAGGGGCTGGCTGGAGTGAAGCCATGGATGCTTTATAAGGCGGAGAATAAGGTATTTTCGGCGTTACAACACTGGCTAAAGTACAAAACGAGGAACGAGACGGGTGAGGATTGGCCGTGCCGGGAAGCGGTGTCGATGGAGCCGTGTCTCCAAGTGCCGCCGGTGTGCGATTGCGATGAGATGAAAAGAATGGATGGAGGGAATGTTTTGCCTTATGTGATACATTGTGAAGATGCGAGCTGGGGCCTCAAATTAGGTTGA 1530 48.3 MISPFCCIIHPGFTNNNPRNNDKFINGLLPPDFDKKSCLSRYQLNLHRKPSPHKPSFPLLSKLRRYEALHRRCAPNSPSFRQALLRLTSPTNSTTPSHHDCKYIVILTRDGLGNRILAILSAFFYALISNRVILIDPGNTLEDLFCEPFLESSWLLPSDFPLRNKFGSFRQSFPESFGNILRNGMRKKTLEDSRPPPYLYLHLSHDADDYDKLFYCDRQQNLLKKVPWLIMETNNYLVPGIFLVSSFRQELNELFPAKDTVFHHLGRYLFHPTNDVWGLILRSYKPYVARANEMVGIQVRIFGSESGSIQDQINQILACTQKKKLLPETEPSSPEKTNFSTSQKVKVVLVTSLNSQYSETLKEMYWEHPTVDGEVVAVYQPSHEGVQSSDNRIHNRKALAEMYLLSLSDVLVTSDWSTFGYVAQGLAGVKPWMLYKAENKVFSALQHWLKYKTRNETGEDWPCREAVSMEPCLQVPPVCDCDEMKRMDGGNVLPYVIHCEDASWGLKLG* 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15537493 15539022 - Chy7G138890.1 Chy07g01059 231070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01059 509 PANTHER FUCOSYLTRANSFERASE 2-RELATED 15 441 IPR004938 GO:0008107|GO:0016020|GO:0042546
Chy07g01059 509 Gene3D - 283 448 - -
Chy07g01059 509 Pfam Xyloglucan fucosyltransferase 16 441 IPR004938 GO:0008107|GO:0016020|GO:0042546
Chy07g01059 509 Pfam Xyloglucan fucosyltransferase 443 481 IPR004938 GO:0008107|GO:0016020|GO:0042546
Chy07g01059 509 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 15 441 - -
Chy07g01059 509 PANTHER FUCOSYLTRANSFERASE 2-RELATED 444 508 IPR004938 GO:0008107|GO:0016020|GO:0042546
Chy07g01059 509 Gene3D - 98 147 - -
Chy07g01059 509 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 444 508 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01059 Chy-Chr7:15537493 Chy12g01529 Chy-Chr12:19032616 1.66E-179 dispersed
Chy07g01059 Chy-Chr7:15537493 Chy10g01025 Chy-Chr10:15563589 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01059 K13681 - csv:101222105 988.793