Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01075 ATGCTTCGTAGCGTAATCCCTCATTCCCCCATCAATTCCACTTCCAACAATTCTCCTTCCTCCATGAAGTCTAAACGCTCCGATCACCATCACCATCCCGACTCCAACCCCTCCACCACCGCCGACTCCTCCCCGGACCACCCTCCCTCCAAGCGCCTCAATTCCAGTCACGACCACGACCACGACCCTCCTCCTCCCCTCGACCCCACCGACTCCACCGGTTTGCGTTTGCTCGGCCTTCTCCTTCAATGCGCCGAGTGCGTTGCCATCGATAACCTCCAAGAGGCCAACGATCTCTTACCCGAAATCTCCGAGCTCTCCTCGCCCTTTGGAACCTCACCGGAGCGCGTCGGCGCCTACTTCGCCCACGCGCTTCAAGCTAGAGTCATAAGTTCCTGCTTAGGAACTTACTCGCCCTTAACCATTAGAACACTGAATCAAACTCAATCGCAGAGGATTTTCAACGCTCTTCAATCTTACAATTCCATCAGTCCGTTGATTAAGTTTTCTCACTTCACCGCTAATCAAGCCATCTTCCAAGCCTTAGACGGTGAAGATCGAGTCCACGTTATCGATCTCGACGTAATGCAAGGTCTCCAATGGCCTGGATTATTCCACATCCTCGCTTCTCGGCCAAAGAAAATCCAATCCCTACGAATCTCCGGCTTCGGATCCTCTTCCGATTTGCTCCAATCAACAGGACGAAGACTGGGGGATTTCGCAACATCTCTAGGCCTCCCCTTCGAATTCCATCCAGTGGAAGGCAAAATCGGGAACCTAACAAACCCGGATCAACTGGAATTGAGATCCGGGGAAGCAGTAGTAGTTCATTGGATGCATCATTGCTTATACGACGTAACGGGAAGCGATATAGGTACGCTTCGATTACTTTCAACTCTAAAACCAAAAATAATCACGATTGTTGAACAAGATCTGAGCCATGGAGGCAGTTTTTTAGGAAGATTTGTAGAAGCTTTACATTATTATAGCGCGTTATTTGACGCGCTTGGTGATAGTTTAGGGATGGATAGTATTGAAAGACATGTGGTGGAACAGCAATTGTTTGGGTGTGAGATCAGGAACATTATCGCCGTTGGTGGACCCAAAAGAACTGGTGAAGTTAAGGTCGAAAGATGGGGAGATGAACTCAAACGCCTCGGCTTTAAACCCCTTTCTCTTCGTGGAAACCCCGCTGCTCAAGCCAGTTTACTTCTAGGGATGTTCCCTTGGAAAGGCTATACTCTTGTTGAAGAGAATGGGTGTCTTAAACTTGGGTGGAAGGATTTATCTCTTCTTACCGCCTCAGCATGGCAGCCCACATAA 1323 49.21 MLRSVIPHSPINSTSNNSPSSMKSKRSDHHHHPDSNPSTTADSSPDHPPSKRLNSSHDHDHDPPPPLDPTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPERVGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQAIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRRLGDFATSLGLPFEFHPVEGKIGNLTNPDQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRLLSTLKPKIITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLFGCEIRNIIAVGGPKRTGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQPT* 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15698434 15699756 + Chy7G139050.1 Chy07g01075 231086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01075 440 MobiDBLite consensus disorder prediction 1 72 - -
Chy07g01075 440 Pfam GRAS domain family 79 438 IPR005202 -
Chy07g01075 440 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 438 IPR005202 -
Chy07g01075 440 ProSiteProfiles GRAS family profile. 68 438 IPR005202 -
Chy07g01075 440 PANTHER SCARECROW-LIKE PROTEIN 23 17 438 - -
Chy07g01075 440 MobiDBLite consensus disorder prediction 7 22 - -
Chy07g01075 440 MobiDBLite consensus disorder prediction 51 66 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01075 Chy-Chr7:15698434 Chy08g00536 Chy-Chr8:12746775 1.95E-162 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18316 PF03514 GRAS 1.80E-115 CL0063 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01075 - - csv:101212169 822.387