Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01104 ATGGGATCCAGTGGAAGTAAATCGTCGAGTAGTTCGCTGCCGGCGCCGGAGACTCTCTCCTGTTCTGGGAGAATCCGGAGGGGGAGATCCAAAGGCCGGAGAGTTTTTCAGTCTGCTTGCCTTGGTACCTCCTCTGGATCGCACCATAGCGACAATGACGATAATGATTCTGAAAGTGAGAACAAAAAGAATGCTCATGATTATTCATCTACAAATCAGACTGCTCAAGCATTAGATCAGATGAAAGTTGAGGGCTACAGAAGGGTAAAAGCTGAGGAATCTGTTGAAATGCCTTGCATATCATCGAATGCTACACTTAATGGATGGGATCAAGCAGGTGTTGCTGTTACAGCCCCCAGAGCTGGAAGCACCTCTGCTCGTGTATCTTCCCTGCAATCGTTGAACACTTCAAGTAACTTCCTTTCTCGCTTTAGTTTCATTCCTGGTAATGTAAGCTTTAGACTTAGTAGAGCAAGCAGCTTAGGATCATCTAGATCTTATCCTGTGTCTTCAACAAATCTCTCGATGTTGAATGATGAAAACGAGCCTCATCTATCAGACAGACCTGCTAGAGGCTTGGATGGTCAAGATGAAACTCAACAAGGTAGGGACTTGCTTCCTGCATCAGTAGCTAGTGAAACTCATACTCAATGTTATGGAGACAGTCCTGCTAGTTTTAGGTTAAATACACAACCTTCTGGTCTTTCTGATAACTTACAAGGGAATCAGTCAGTTTCTTCTACCCATGACATGGCTGGTGCTTGTGATAATTTTGGAGTAGGGTCAGGAAGCCTTTCCCATCCTCGAACTCTACCTGAAAACGAAAGCAGTGAGATTAGACAATCTGACAGGCGGACTGGATCTAGAGAACCGGTTGAGCGGAATTTTCGTTTTAGTCGGACACTTAGTGTTGGAAGACTCCGTGATAGAGTTCTTCGGAGATCATCGTTATCTGACTTCACATTTTGTCCTCCTCAACAAGAGGGAGATGAGAGAGATGCAAGTCATAGTGGCGATGACCAACATGTATGGACTGCTGAAACAAGGGGTTTGGCATCTGAAGATAATGTTATGAGCTCACCAACAACATCAGGTTTTCAAGCTTCTAGTCTATCCAGTTCCATTTTCAGCAGCCAAGATTTTGAAGTGGATACTACCCGACCTAGAGAAGCTAGATATCACGATTTGCTGGAACACAGATCAAATTTCCTTGAACGAAGAAGAAGAATACGGTCCCAGGTTCGTGCCCTACAGCGGCTGGGAAGTCGCTTTGAGAACCTATCTGGGCATGAGAGATCATGTATATTATCCGGTCAGCATAGAACCGGTCATTGTACTTGTCGTATCAACAATCGTGACACAAATATAAATGATAACACCAGTGCTAGAGCCAGTATATCAAGAATTGTAATGTTAGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGTAGTTTTATCCTCCCGCCCTGCATCTTCTATTGGCTCTCTACCTGCACCGAACGATGTTGTAGATTCTTTGCCTGTTAAATTTCATTCCAAGTTGCAAAAGCATCAAAGCGAGGAAGCTGCCCAATGCTACATATGCCTGGTCGAGTACGAGGAAGGAGATAGCATGAGAGTCTTGCCTTGCCATCATGAGTTTCACACCACATGTGTCGACAAATGGCTGAAGGAGATTCACAGGGTATGTCCACTTTGTCGAGGAGACATATGCAGCAGATCTGATGCGTTGTCAGACGATGTCAATATCGGAAAGGGAGAGATTTGTTTGTTTGGTAGCATCAGCTATGAGTACGATGGGATGGCCCCTCGTCTTGCCGGAACAAATACACAGGACTGCACCAATCCGAATTCTTAA 1872 44.71 MGSSGSKSSSSSLPAPETLSCSGRIRRGRSKGRRVFQSACLGTSSGSHHSDNDDNDSESENKKNAHDYSSTNQTAQALDQMKVEGYRRVKAEESVEMPCISSNATLNGWDQAGVAVTAPRAGSTSARVSSLQSLNTSSNFLSRFSFIPGNVSFRLSRASSLGSSRSYPVSSTNLSMLNDENEPHLSDRPARGLDGQDETQQGRDLLPASVASETHTQCYGDSPASFRLNTQPSGLSDNLQGNQSVSSTHDMAGACDNFGVGSGSLSHPRTLPENESSEIRQSDRRTGSREPVERNFRFSRTLSVGRLRDRVLRRSSLSDFTFCPPQQEGDERDASHSGDDQHVWTAETRGLASEDNVMSSPTTSGFQASSLSSSIFSSQDFEVDTTRPREARYHDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHERSCILSGQHRTGHCTCRINNRDTNINDNTSARASISRIVMLAEALFEVLDEIHQQSVVLSSRPASSIGSLPAPNDVVDSLPVKFHSKLQKHQSEEAAQCYICLVEYEEGDSMRVLPCHHEFHTTCVDKWLKEIHRVCPLCRGDICSRSDALSDDVNIGKGEICLFGSISYEYDGMAPRLAGTNTQDCTNPNS* 624
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15990705 15995013 - Chy7G139340.1 Chy07g01104 231115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01104 623 ProSiteProfiles Zinc finger RING-type profile. 530 572 IPR001841 -
Chy07g01104 623 MobiDBLite consensus disorder prediction 161 180 - -
Chy07g01104 623 MobiDBLite consensus disorder prediction 1 79 - -
Chy07g01104 623 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 493 577 IPR013083 -
Chy07g01104 623 MobiDBLite consensus disorder prediction 161 200 - -
Chy07g01104 623 SMART ring_2 530 571 IPR001841 -
Chy07g01104 623 MobiDBLite consensus disorder prediction 1 18 - -
Chy07g01104 623 MobiDBLite consensus disorder prediction 212 251 - -
Chy07g01104 623 MobiDBLite consensus disorder prediction 320 339 - -
Chy07g01104 623 Pfam Ring finger domain 529 572 IPR001841 -
Chy07g01104 623 MobiDBLite consensus disorder prediction 181 198 - -
Chy07g01104 623 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 579 - -
Chy07g01104 623 MobiDBLite consensus disorder prediction 273 292 - -
Chy07g01104 623 MobiDBLite consensus disorder prediction 49 65 - -
Chy07g01104 623 CDD mRING-H2-C3H2C2D_ZSWM2 529 572 - -
Chy07g01104 623 MobiDBLite consensus disorder prediction 212 292 - -
Chy07g01104 623 SUPERFAMILY RING/U-box 518 578 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02078 Chy-Chr2:25135587 Chy07g01104 Chy-Chr7:15990705 3.99E-48 dispersed
Chy07g01104 Chy-Chr7:15990705 Chy05g01130 Chy-Chr5:15780704 2.30E-12 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01104 - - csv:101213468 1055.43