Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01106 ATGGGGAGTGAAAAGTTTGGGCTATGGCTATTTTTTGTTGCTTCTGTACAGTTTTTCCTTAAAGCACAGTGTATTAATGTAGGCATTACTTATGTTCAAGATGCTGTTATCAAAGGAGCTGTTTGTTTGGATGGAAGTCCTCCAGCTTATCACTTCAGCGACGGGTTTGGCTCTGGGATCAATAATTGGTTGATTCAACTGGAGGGAGGAGGCTGGTGCAACAATGTCACAACTTGCCTCCAACGCAGGGACACTCGTTTAGGATCGTCTAAGAAAATGGTAACCCAGCTTGCGTTCTCGGGAATTTTGAGCAATAAACCGCAATTCAATCCAGATTTCTATAACTGGAACAGAATCAAGGTTCGATACTGTGATGGATCTTCTTTTACTGGAGACGTTGAAGCCGTTGATCCTGCTACCAATCTGCATTTCAGAGGAGCAAGAGTTTTTCGTGCCATCATCGATAACCTACTCGCCAAGGGAATGAAGAATGCAAAAAACGCTATTCTCTCGGGTTGCTCAGCGGGTGGATTAAGTTCCATTTTGCATTGCGATAACTTTAAATCTCTACTTCCTCCTACTACTAAGGTGAAGTGCCTCTCAGATGCAGGATACTTCATCAACGCGAAAGACGTCTCTGGAGCACAACACATCGAAGGCTTCTACAGCGATGTAGTTACCACCCACGGTTCTGCCAAGAATTTGCCTATATCATGCACGTCAAAAATGAAACCTGAGATGTGTTTCTTTCCTCAAAATGTGGTTCAGCTCATTCAGACTCCAATATTTCTTGTAAATGCAGCTTATGATTCATGGCAGATAAAGAATATACTGGCACCTGGTGTTGCTGATCCTCACGGTACTTGGCACGAATGCAAGCTCGACATCAAAAACTGCTCACCAATTCAGCTTCGTACTATGCAAGACTTCAGGGTTCAGTTTTTGAGTGCATTGAATGGGGTTGGAAGTTCTTTATCAAGAGGATTGTTCATAGATTCTTGCTATGCCCATTGCCAAACCGAAATGCAGGAGACGTGGTTACGAACGGACTCTCCCGTGCTGAGTAAGACGCCCATTGCAAAGGCAGTTGGAGACTGGTTTTTCGATAGGGCTCCGTTCCAGAAGATCGACTGTCCTTACCCGTGCAACCCGACTTGCCACAACCGCATCTTCGAAGCAAAAGACCACCTTGAATGA 1197 44.61 MGSEKFGLWLFFVASVQFFLKAQCINVGITYVQDAVIKGAVCLDGSPPAYHFSDGFGSGINNWLIQLEGGGWCNNVTTCLQRRDTRLGSSKKMVTQLAFSGILSNKPQFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPATNLHFRGARVFRAIIDNLLAKGMKNAKNAILSGCSAGGLSSILHCDNFKSLLPPTTKVKCLSDAGYFINAKDVSGAQHIEGFYSDVVTTHGSAKNLPISCTSKMKPEMCFFPQNVVQLIQTPIFLVNAAYDSWQIKNILAPGVADPHGTWHECKLDIKNCSPIQLRTMQDFRVQFLSALNGVGSSLSRGLFIDSCYAHCQTEMQETWLRTDSPVLSKTPIAKAVGDWFFDRAPFQKIDCPYPCNPTCHNRIFEAKDHLE* 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16004743 16007274 - Chy7G139360.1 Chy07g01106 231117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01106 398 Pfam Pectinacetylesterase 22 371 IPR004963 GO:0016787
Chy07g01106 398 PANTHER NOTUM-RELATED 5 394 IPR004963 GO:0016787
Chy07g01106 398 PANTHER PECTIN ACETYLESTERASE 5 394 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01106 Chy-Chr7:16004743 Chy08g01082 Chy-Chr8:17979138 1.68E-155 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01106 K19882 - csv:101214431 829.32