Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01133 ATGGCTAATCGGGGTGGAGGGTCGCTTTTACCCTCAAGTAGTACTTCGATTCAAGGTTGGTGTGGAGATGAACTTTATACTGAGCTATGGAAGGTCTCGGCTGGACCTCTTGTGGAAATTCCTCGAATTAATGAGAAGGTTTTATATTTTCCTCAAGGCCATATGGAACAGTTGGAGGCATCTACAAATCAGGAGCTAAATCAGAAACTTCCTTTGTTTAATCTTCCCCCCAAAATTCTTTGTCAAGTAGTTGATACCCGGCTGCTGGCTGAGCAGGATTCAGATGAGGTTTATGCACAGATAACTTTAATGCCAGAAGCTAATCAAGCGCTACCTTCAACTTTTGAACCTCCACTAATAGAGTGTCGAAAAACAAAAGTCCATTCGTTTTGCAAGGTTCTAACTGCTTCTGATACTAGCACTCATGGAGGGTTCTCCGTGCTTCGGAAACATGCCACAGAATGCCTGCCTCCATTGGATATGACCCAGCAGACCCCAACTCAGGAACTCGTAGCCAAAGATCTTCATGGTTATGAGTGGCGATTCAAGCATATATTTAGGGGTCAACCACGAAGGCATTTGCTGACAACCGGATGGAGCACCTTTGTGACTTCTAAGAGACTGGTTGCTGGAGATTCTTTTGTTTTCTTGAGGGGGGAAAATGGAGAATTGCGAGTTGGAGTAAGGCGTCTTGCTCGCCAACAAAGCAGCATGCCTTCATCTGTGATTTCGAGTCACAGCATGCACTTAGGAGTGCTTGCTACTGCATCTCATGCCGTGTCGACTCAAACTCGCTTTGTTGTCTATTATAAGCCAAGGGCAAGCCAGTTTATCGTCAGCTTGAGTAAGTACATGGAAGCGATGAACAATAAGTTCATGGTTGGGATGAGGTTCAAGATGAGGTTTGAGGGTGAGGAGTCTCCTGAGAGAAGGTTTTCGGGTACCATAGTCGGAGTTGACGACATGTCTCCTCACTGGCCCAATTCAGAATGGCGATCACTGAGAGTTCAATGGGATGAACTTGCATCTATTCAGAGACCTGATAGGGTTTCACCATGGGAGATCGAACCTTTCGTAGCTCCTACGCCGAGCATTCCGCACTCTATTTCAGTAAAGAATAAAAGGCCTCGGCCTCCACTTGAAATTCCAGATTCCGATAATTCAACTGTAACAACACTACGACATCCTGGATCAACATCACATGATGATAGAACACAGCTGAGTGTTTCTGCTGCTGAACTTAAACGATTTGAAAATCATGCAACATGGCATTACAAGCAAACAGATGCTGGCGGCAATGGAAATTCTGTATCAAGGACCGCAATGGAGGGATCTTGGTTAGCATCCTCAAGTGGCTGTGTTTCTCAGCATCGGTTACATGATTTGACAGATGACCGTAAAAGCGGTTCTGTTTGGTCAACGGTCTTTCCAGGACCGCTGGCATCACACTCAACATGTCCAACTCCACGGTCTTCAAATCCGAAGAGTGACCAGGTACAGGACCTTGGGGAAAAGGGGAAGAAAGCTGAGGGGGCTCCAAGCTGTCGGTTGTTTGGGATTGAGCTCATCAATCATTCTAAGAGCCCAGTTCTCACCGAAAGAGTGGCTGATCAACCAAATGGCACACCAAATGAAATCACTGAGGCAGAGCAGAACTCAAACCTGCCAAAGATTTCCAAAGAAAGAAAATTAGGACTTTTACAAGTAACTCCTAAAGAGATCCAGCACAAGCAGAACAGCTCGACCAGCAGCCGAAGCCGTACCAAGGTTCAAATGCAGGGGATGGCCGTTGGACGGGCAGTGGACCTTACCACATTGGAGGGTTATGGCCAACTCATTGATGAATTGGAAAAAATGTTTGATATCAAGGGAGAACTTCGTCCTCGTAACAAGTGGGAGATTGTTTTCACCGACGATGAAGGAGATATGATGCTCATGGGCGATTACCCCTGGCAGGAATTCTGTAACATGGTGAGAAGAATATATATATGGTCAAGTCAGGATGTGAAGATGGGTTCGGTTAGCAAACTTGCGATGTCTGCACTCGAATGTGACGGCACAGTAATAACCTCGGAGTCGGCTGACAGCTGA 2091 46.15 MANRGGGSLLPSSSTSIQGWCGDELYTELWKVSAGPLVEIPRINEKVLYFPQGHMEQLEASTNQELNQKLPLFNLPPKILCQVVDTRLLAEQDSDEVYAQITLMPEANQALPSTFEPPLIECRKTKVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPRASQFIVSLSKYMEAMNNKFMVGMRFKMRFEGEESPERRFSGTIVGVDDMSPHWPNSEWRSLRVQWDELASIQRPDRVSPWEIEPFVAPTPSIPHSISVKNKRPRPPLEIPDSDNSTVTTLRHPGSTSHDDRTQLSVSAAELKRFENHATWHYKQTDAGGNGNSVSRTAMEGSWLASSSGCVSQHRLHDLTDDRKSGSVWSTVFPGPLASHSTCPTPRSSNPKSDQVQDLGEKGKKAEGAPSCRLFGIELINHSKSPVLTERVADQPNGTPNEITEAEQNSNLPKISKERKLGLLQVTPKEIQHKQNSSTSSRSRTKVQMQGMAVGRAVDLTTLEGYGQLIDELEKMFDIKGELRPRNKWEIVFTDDEGDMMLMGDYPWQEFCNMVRRIYIWSSQDVKMGSVSKLAMSALECDGTVITSESADS* 697
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16265895 16269453 - Chy7G139630.1 Chy07g01133 231144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01133 696 SUPERFAMILY DNA-binding pseudobarrel domain 115 259 IPR015300 -
Chy07g01133 696 SMART B3_2 130 232 IPR003340 GO:0003677
Chy07g01133 696 MobiDBLite consensus disorder prediction 481 499 - -
Chy07g01133 696 Gene3D - 580 672 - -
Chy07g01133 696 PANTHER AUXIN RESPONSE FACTOR 9 20 683 - -
Chy07g01133 696 SUPERFAMILY CAD & PB1 domains 579 661 - -
Chy07g01133 696 Gene3D - 127 231 IPR015300 -
Chy07g01133 696 Pfam B3 DNA binding domain 130 230 IPR003340 GO:0003677
Chy07g01133 696 Gene3D - 291 362 - -
Chy07g01133 696 ProSiteProfiles PB1 domain profile. 585 666 IPR000270 GO:0005515
Chy07g01133 696 MobiDBLite consensus disorder prediction 384 405 - -
Chy07g01133 696 MobiDBLite consensus disorder prediction 481 510 - -
Chy07g01133 696 Pfam AUX/IAA family 632 668 IPR033389 -
Chy07g01133 696 Pfam AUX/IAA family 573 621 IPR033389 -
Chy07g01133 696 ProSiteProfiles B3 DNA-binding domain profile. 130 232 IPR003340 GO:0003677
Chy07g01133 696 CDD B3_DNA 128 230 IPR003340 GO:0003677
Chy07g01133 696 Pfam Auxin response factor 256 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Chy07g01133 696 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 20 683 IPR044835 GO:0003677|GO:0006355|GO:0009725
Chy07g01133 696 MobiDBLite consensus disorder prediction 364 405 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy07g01133 Chy09g01305 CCT
Chy07g01133 Chy09g01305 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01310 Chy-Chr1:16826589 Chy07g01133 Chy-Chr7:16265895 0 dispersed
Chy02g02705 Chy-Chr2:29881835 Chy07g01133 Chy-Chr7:16265895 6.87E-28 dispersed
Chy05g01480 Chy-Chr5:18553235 Chy07g01133 Chy-Chr7:16265895 2.58E-15 dispersed
Chy07g01133 Chy-Chr7:16265895 Chy09g01305 Chy-Chr9:15000111 1.44E-46 dispersed
Chy09g01306 Chy-Chr9:15004646 Chy07g01133 Chy-Chr7:16265895 4.61E-41 dispersed
Chy07g01133 Chy-Chr7:16265895 Chy02g00116 Chy-Chr2:835963 5.50E-14 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18322 PF02362 B3 6.90E-22 CL0405 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01133 K14486 - csv:101213942 1374.38