Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01186 ATGGCCACGGTGACCACCCATAATGCGACGGCGCCTGCTGGTGTTTGTCCTCCTGCTATGAAAGCCACCTCCGATGGCATTTTTCAAGGCGATAATCCTCTTAATTATGCTCTTCCTCTTGCCATCCTTCAGATTTGTCTCGTCGTCCTTCTCACTCGCCTTCTCTCTTTCCTCCTTCGTCCCATCCGCCAACCTCGTGTTATTGCTGAGATCGTCGGCGGCATCTTGTTGGGTCCATCGGCACTTGGCCGGAACTTGGGCTACTTACACACAATCTTCCCGCCGAGGAGTCTCACCGTATTAGACACATTGGCCAATTTGGGTCTTCTCTTCTTTCTATTTCTCGTCGGCTTGGAGTTAGACCTTAAATCCCTCCGCCGCACCGGAAAACGAGCCATGTGCATTGCCTTTGCTGGGATCACTCTCCCCTTCGTCCTTGGAATCGGTACCTCCTTCATTCTGCGATCAACCATCTCCAAAGGCGTCAATGAAGCTGCATTGCTCGTCTTTATGGGTGTCGCTCTTTCCATCACTGCCTTCCCTGTTCTCGCTCGAATTTTGGCCGAGCTCAAGCTTTTGACAACCGATGTCGGTCGGATGGCTATGTCCGCCGCTGCCGTTAACGACGTCGCAGCCTGGATCCTTCTAGCGCTGGCAATTGCACTCTCTGGCACCGGAAACTCCCCTCTCGTCTCCCTCTGGGTTTTCCTCTCTGGAGCTGGTTTTATTATTTTTTGTACCTTCGCAATTCCACCGGTGTTCCGGTGGATGTCGGAACGGTGTTCTGAGGGTGAGCCGGTTAAGGAATTGTACATTTGTGCCACCCTTTCCATTGTTTTGGCTGCTGGGTTCATGACGGATTTGATCGGAATCCATGCCCTCTTTGGAGCTTTCGTCGTTGGTGTTTTGATTCCGAAAGATGGACCATTTGCCGGAGCTTTAGTTGAGAAAGTTGAGGATCTTGTCTCCGGTCTTTTCCTTCCATTATACTTCGTTTCCAGTGGATTGAAAACAAATGTTGCAACAATTAAAGGAGCTAAATCATGGGGCCTTCTTGTTTTAGTCATTTTCAATGCTTGTTTCGGTAAAATCGTCGGAACTGTCTCTGTTTCGCTGCTCTGCAAAATGCCATTTGCAGAATCACTTGCTTTGGGGTTCTTAATGAACACGAAAGGCTTGGTGGAATTAATTGTTTTAAACATCGGCAAAGATAGGAAGGTTTTGAATGATCAAACATTTGCAATTATGGTTCTAATGGCAATCTTCACAACATTCATCACAACCCCGATTGTTATTGCTGTCTACAAGCCGGCCAAAAAACATACCAAATCTAATTACCAGCATAGAACAATAGAGAGGAAAAATCCTAATTCCGAGCTTCGAATTCTTGCTTGCTTCCATTCCTACGGAAACATTCCGGCGACGATTAACCTTATTGAAGCTTCTCGAGGGATTGAGAAAAAAGATGGGCTATGTGTTTATGCTCTGCATTTAACAGAGCTAACAGAGAGATCATCCGCCATTCTTATGGTTCACAAAGCAAGGAAAAACGGAGTCCCCTTTTGGAACAAAAGTCGGGTTGATTCGAACCAGATCGTTGTCGCCTTCGAGGCATTTCGACAACTTAGCCGGGTTTCAATCCGGCCAATGACTGCCATTTCTGCTCTGTCCAACATGCACGAAGATATCTGTAGCAGCGCCGAAACGAAAAGGGCCGCCGTTATAATCCTTCCATTTCACAAACATCAAAGATTGGATGGATCTCTTGAAACGACGAGGACTGATTACAGGTCAGTTAACCGAAAAGTTCTGGAACAAGCCCCCTGCTCCATCGCAATTTTGATCGACAGAGGACTAGGCGGTGGGTCTCACGTCAATGCAAGTAACGTCTCTTCCACAGTCACAGTCTTTTTCTTCGGCGGGCCTGACGACCGTGAAGCTCTGGCGTTTGGAAAAAGAATGTCGGAACATCCCGGAATTAGGCTGCAGGTTGTCCGATTCACACCCAGCACCGATTTCGTGACGGAATCCGTCGCGGTCGACGTAAAAAATAATAGTTCGGAGGATTCTGACGGTGATAATAAAGCGTTAACGTCGATTGCGTATGAGGAGAGAAACGTGAGCAAAGGGAGCCAGGCCGTAGATGCAATGAAGGAATTTAATAAATCGAATTTGATTTTGGTAGGAAGATGCCCGGAGGGGGAAGTGGTGAGGAGTTTGAATACAAACGGTGGGGATTGTTCAGAGCTTGGACCAGTGGGCGGGGTGTTGGCATTACCGGAATTTTCGACGACGGCATCGGTGCTGGTGGTGCAGCAATTTCGCGGTGAACAATCAGCGTTCCCAATGGAGTCCACTTCCACTTCAAAAGGGGAATCTACCGAAGATGAACGTTGA 2397 47.93 MATVTTHNATAPAGVCPPAMKATSDGIFQGDNPLNYALPLAILQICLVVLLTRLLSFLLRPIRQPRVIAEIVGGILLGPSALGRNLGYLHTIFPPRSLTVLDTLANLGLLFFLFLVGLELDLKSLRRTGKRAMCIAFAGITLPFVLGIGTSFILRSTISKGVNEAALLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGTGNSPLVSLWVFLSGAGFIIFCTFAIPPVFRWMSERCSEGEPVKELYICATLSIVLAAGFMTDLIGIHALFGAFVVGVLIPKDGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIKGAKSWGLLVLVIFNACFGKIVGTVSVSLLCKMPFAESLALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMVLMAIFTTFITTPIVIAVYKPAKKHTKSNYQHRTIERKNPNSELRILACFHSYGNIPATINLIEASRGIEKKDGLCVYALHLTELTERSSAILMVHKARKNGVPFWNKSRVDSNQIVVAFEAFRQLSRVSIRPMTAISALSNMHEDICSSAETKRAAVIILPFHKHQRLDGSLETTRTDYRSVNRKVLEQAPCSIAILIDRGLGGGSHVNASNVSSTVTVFFFGGPDDREALAFGKRMSEHPGIRLQVVRFTPSTDFVTESVAVDVKNNSSEDSDGDNKALTSIAYEERNVSKGSQAVDAMKEFNKSNLILVGRCPEGEVVRSLNTNGGDCSELGPVGGVLALPEFSTTASVLVVQQFRGEQSAFPMESTSTSKGESTEDER* 799
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16713602 16716628 + Chy7G140160.1 Chy07g01186 231197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01186 798 PANTHER CATION/H + ANTIPORTER 15 781 - -
Chy07g01186 798 Pfam Sodium/hydrogen exchanger family 46 430 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Chy07g01186 798 MobiDBLite consensus disorder prediction 779 798 - -
Chy07g01186 798 Gene3D - 40 445 IPR038770 -
Chy07g01186 798 PANTHER CATION/H(+) ANTIPORTER 17 15 781 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01184 Chy-Chr7:16676681 Chy07g01186 Chy-Chr7:16713602 0 dispersed
Chy07g01186 Chy-Chr7:16713602 Chy11g00045 Chy-Chr11:506131 0 dispersed
Chy07g01185 Chy-Chr7:16704459 Chy07g01186 Chy-Chr7:16713602 0 tandem
Chy07g01186 Chy-Chr7:16713602 Chy07g01187 Chy-Chr7:16727132 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01186 - - csv:101202937 1455.27