Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01199 ATGGGTGATGACAATATTAATCAAATGGGAAGTACTAGTTCATCATCAATGATGAATAATTGTGAGATTATTGATTGGGATGGGCTATTTTCTAGTTCTTGTTTGAGTGATAATTTGGAGATGGTAGAGAAGGGAATTTGTGGAAGTGATCAAGATGATAATAATTATTATCCAATGGGAGATAATAATAATAATGTTGTTATTGGAGGAGTAAAAGAGGGTGATATTATTATTGGTGGAGGGAATAACAACAACAACAACAACAATATTAAGTATAAAGGGAAAATGGTGATGGGTAAAAGAAGAAGTACAATGGCTTCTCCAAGAATTGCTTTTCAAACAAAAAGTGTTGAGGATGTTCTTGATGATGGCTATAGATGGAGGAAATATGGTCAGAAGGCTGTCAAACATAGCAACCATCCTAGGAGCTATTACAGGTGTACACATCACACATGCAATGTTAAGAAACAAATTCAAAGGCATTCAAAGGATCCAACCATAGTGGTTACAACATATGAAGGAATTCACAATCATCCATCTGAGAAATTAATGGAAACTCTAACCCCTCTTCTCAAGCAATTGCAATTCCTTTCAGGCATTTAG 603 34.83 MGDDNINQMGSTSSSSMMNNCEIIDWDGLFSSSCLSDNLEMVEKGICGSDQDDNNYYPMGDNNNNVVIGGVKEGDIIIGGGNNNNNNNNIKYKGKMVMGKRRSTMASPRIAFQTKSVEDVLDDGYRWRKYGQKAVKHSNHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLTPLLKQLQFLSGI* 201
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16844695 16846475 - Chy7G140290.1 Chy07g01199 231210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01199 200 Pfam WRKY DNA -binding domain 122 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy07g01199 200 ProSiteProfiles WRKY domain profile. 116 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy07g01199 200 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 196 IPR044810 GO:0003700
Chy07g01199 200 Gene3D WRKY domain 106 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy07g01199 200 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 14 196 - -
Chy07g01199 200 SUPERFAMILY WRKY DNA-binding domain 116 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy07g01199 200 SMART WRKY_cls 121 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01199 Chy-Chr7:16844695 Chy01g01770 Chy-Chr1:23354401 4.67E-33 dispersed
Chy07g01479 Chy-Chr7:19127167 Chy07g01199 Chy-Chr7:16844695 1.20E-37 transposed
Chy06g00143 Chy-Chr6:922569 Chy07g01199 Chy-Chr7:16844695 1.67E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18328 PF03106 WRKY 8.20E-25 CL0274 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01199 - - csv:101221558 347.821