Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01218 ATGTTTGACAAAGTTGTAACACCAAGCGATGTGGGGAAACTAAACCGTTTAGTTATCCCAAAACAACATGCTGAAAAATACTTCCCACTTGATTCTTCATCAAACGAAAAAGGTCTTCTCTTAAACTTCGAAGATCGTTGTGGTAAACTATGGCGGTTTCGTTACTCTTACTGGACTAGTAGCCAAAGCTATGTCATGACTAAAGGTTGGAGCCGCTTTGTCAAAGACAAAAGACTCGATGCTGGTGATATTGTTTCTTTTCAAAGACCCCTTCATCGTAATCAAGATCGTTTCTTTATCGATTGGCGACGCCGTCCTCCGCACCCGGCTGTCGACATGCCTTTTCATTTCCACCGCCATGATGGTGGCACCGGTGCCGCCCAATTTCCTCCTCCTCCTCATCATCATCACCATTTTCAGCTTCATAGCCAGTGGAATAATAATCCAGTGGCCACACCCTTATCTTTACAAAGGGACCACGTCCTCCACTTGCCACAGTATAATAATAATGTCAGTTTATTTCATAATACATATAATCATCATCCTCATCATAATCGTTATCTTGACGGTTCGTATGGTGGAGCATCGGTCTTTTACCATTTGAGATCCCCAATCGCACCACCGCAGATAGAGTCGGTGCCAGTTGTAGCGGATGGAAATGGTGGTAATGGTGGTGGAGGTAGTGGAATTGGGAGAACGTCTGCGGCTAAGACCACGTTGAGGCTTTTTGGTGTTGACATGGAATGTGAGGTATCTGATGATGAGTGTGACGTAGCCACAACTTCGAAGACAATGTCATCGTCGTCGCAATTTCATGTTTATAATGGAATGCCGATGCCGATGCTGACACCGATGACGATGCAGATGCCCACGAGCAATAATAATATATCAACTATGGACTTCTTTGAGAAAGGGAAGTCGTCGATGTCGTCAATGTCATCTTTTGATTTTGGTGCTTGA 960 44.27 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKDKRLDAGDIVSFQRPLHRNQDRFFIDWRRRPPHPAVDMPFHFHRHDGGTGAAQFPPPPHHHHHFQLHSQWNNNPVATPLSLQRDHVLHLPQYNNNVSLFHNTYNHHPHHNRYLDGSYGGASVFYHLRSPIAPPQIESVPVVADGNGGNGGGGSGIGRTSAAKTTLRLFGVDMECEVSDDECDVATTSKTMSSSSQFHVYNGMPMPMLTPMTMQMPTSNNNISTMDFFEKGKSSMSSMSSFDFGA* 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16986631 16987590 - Chy7G140480.1 Chy07g01218 231229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01218 319 CDD B3_DNA 1 89 IPR003340 GO:0003677
Chy07g01218 319 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 1 289 IPR044800 GO:0003700
Chy07g01218 319 Gene3D - 1 112 IPR015300 -
Chy07g01218 319 SMART B3_2 2 106 IPR003340 GO:0003677
Chy07g01218 319 Pfam B3 DNA binding domain 2 105 IPR003340 GO:0003677
Chy07g01218 319 SUPERFAMILY DNA-binding pseudobarrel domain 1 100 IPR015300 -
Chy07g01218 319 ProSiteProfiles B3 DNA-binding domain profile. 2 106 IPR003340 GO:0003677
Chy07g01218 319 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 1 289 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01218 Chy-Chr7:16986631 Chy11g01776 Chy-Chr11:24118846 1.38E-59 dispersed
Chy04g01900 Chy-Chr4:25061405 Chy07g01218 Chy-Chr7:16986631 7.05E-48 transposed
Chy07g01218 Chy-Chr7:16986631 Chy09g01354 Chy-Chr9:15378053 3.21E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18331 PF02362 B3 4.80E-28 CL0405 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01218 - - csv:101220139 608.601