Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01255 ATGGCTACGTTTGTGGAGCCACCGAGCGGAATCAGATCGATGGGGAAGCATTATTATACAATGTGGCAAACTCTGTTTGAAGTTGATACTAAATATGTCCCGATCAAGCCGATTGGGCGAGGTGCTTATGGTGTTGTGTGTTCTTCGATTAACCGAGAGACTAACGAGAAAGTGGCGATCAAGAAAATTCATAATGTGTTTGAGAATCGTACGGACGCCATGAGAACACTGAGGGAGCTGAAGCTTTTGAGGCACATACGGCATGAGAATGTGATTGCTTTGAAGGATGTGATGATGCCAATTCATAGGAAAAGCTTTAAAGATGTTTATTTGGTTTATGAACTCATGGATACAGATCTTCATCAGATTATCAAGTCCCCTCAGCCACTTTCCCATGATCATTGCAAGTACTTTATCTATCAGTTGCTTTGCGGGTTGCAGCATCTTCATTCAGCTAACATTCTTCACCGGGACTTGAAGCCCGGGAACCTCCTTGTCAATGCTAACTGTGATCTCAAGATATGCGATTTTGGGTTGGCACGAACTAGCATGGGCCGTGATCAGTTCATGACTGAGTATGTTGTTACTCGCTGGTATCGGGCTCCAGAACTTCTTCTCTGCTGTGACAACTATGGGACTTCCATCGATGTATGGTCTGTGGGATGCATCTTTGCTGAGATTCTTGGTCGGCAACCTATCTTCCCAGGGACAGAGTGCCTTAACCAACTTAACTTAATTATCACCATTCTCGGTAGTCCGAAGGAAGCAGATGTTGAGTTCATCGACAATGTAAAGGCCAGAAATTATATCAAGTCAATGTCCTTCTCAAGAGGAATACGCCTTTCGCATCTTTATCCACAAGCTGAACCTTTAGCTATAGACTTGTTACAGAAGATGCTTGTGTTTGATCCAACTAAGAGAATAACAGTTGACGAAGCACTTCAACATCCATACATGTCGGGGCTATACGACCCGAAGTTCAATTCTTCTGTTGAGGTTCCTCTCAATCTCGACATTGACGACACACTTGGGGAGCCTAAGATCAGGGAAATGATGTTGAATGAGATGCTATATTACCATCCTGAAGCTGTTTCAACATTTTCTTAA 1107 43.36 MATFVEPPSGIRSMGKHYYTMWQTLFEVDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIHNVFENRTDAMRTLRELKLLRHIRHENVIALKDVMMPIHRKSFKDVYLVYELMDTDLHQIIKSPQPLSHDHCKYFIYQLLCGLQHLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSMGRDQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRQPIFPGTECLNQLNLIITILGSPKEADVEFIDNVKARNYIKSMSFSRGIRLSHLYPQAEPLAIDLLQKMLVFDPTKRITVDEALQHPYMSGLYDPKFNSSVEVPLNLDIDDTLGEPKIREMMLNEMLYYHPEAVSTFS* 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17267359 17268892 + Chy7G140850.1 Chy07g01255 231266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01255 368 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Chy07g01255 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Chy07g01255 368 SUPERFAMILY Protein kinase-like (PK-like) 24 325 IPR011009 -
Chy07g01255 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 364 - -
Chy07g01255 368 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g01255 368 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Chy07g01255 368 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g01255 368 Gene3D Phosphorylase Kinase; domain 1 19 115 - -
Chy07g01255 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 364 - -
Chy07g01255 368 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g01255 368 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01433 Chy-Chr3:17007158 Chy07g01255 Chy-Chr7:17267359 0 dispersed
Chy07g01255 Chy-Chr7:17267359 Chy09g01256 Chy-Chr9:14581312 3.53E-129 dispersed
Chy07g01255 Chy-Chr7:17267359 Chy11g01662 Chy-Chr11:23088308 3.50E-143 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71393 PF00069 Pkinase 2.20E-71 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01255 K20537 - csv:101203896 754.207