Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01266 ATGGCCGGTTTTTTCCCACTAGACGGCGGCGGAAGCGGCGGAAGAGTACCCAATTATCATTTTCCCACTCCAACCACCGGCGGCGAAATTATTCATCCAACAACCGAGGGGTTATTTTGGTACAAGAATTATGAGAGATTGGAAACATGGGAAGGAGAAGAAGAACAGCAACAGCAGCAGCAACCGGCGCAAGAACGAGGGGGAGAAGGGTTTGTTTACTCCGGCGATGAATCGCCGGCAAGATCGTCGTTGGTGATGGTGAGATCGGGGAGAGGCGGGGGCGGTGGAGGAGGGCCGGTAACGAGTTGCCAAGACTGTGGAAATCAAGCCAAAAAAGATTGTGTTCACATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTCGAGTGTGAAACCCACGTGAAAAGCACGTGGGTTCCTGCATCTAAACGCCGTGACCGCCACCTCCGTTCCGACGGCCTTAACTCCAAACGCCCTAAAGACACCCACTACCACCCCACTTCTTCAGGGTTGGACATGGGGAATTTTCCGACGGAAGTGACCACACCGGCAGTGTTTCGGTGTGTACGAATGACAAGCTTGGACGAAACTGACGACCAATATGCGTATCAAACAGCTGTCAATATCGGAGGCCATATTTTTAAAGGCATTCTTTACGATCACGGCCCTGAACAACCACCTCCCCCTCCCTCCTCCTCCTCCGCCGCATTGCTCGATCCAACTCCGCCCTACCCGACTCCTCTCTCCACCTATATCACCGCCGGTACGCAATTTTTTCTTCCTCCATCATCTTAG 795 52.7 MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEQQQQQQPAQERGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS* 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17371774 17372648 - Chy7G140960.1 Chy07g01266 231277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01266 264 MobiDBLite consensus disorder prediction 141 176 - -
Chy07g01266 264 Pfam Domain of unknown function (DUF702) 101 224 - -
Chy07g01266 264 MobiDBLite consensus disorder prediction 141 165 - -
Chy07g01266 264 MobiDBLite consensus disorder prediction 1 32 - -
Chy07g01266 264 MobiDBLite consensus disorder prediction 218 244 - -
Chy07g01266 264 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 225 IPR007818 GO:0003700|GO:0006355
Chy07g01266 264 MobiDBLite consensus disorder prediction 222 244 - -
Chy07g01266 264 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 102 144 IPR006510 -
Chy07g01266 264 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 176 223 IPR006511 -
Chy07g01266 264 MobiDBLite consensus disorder prediction 50 80 - -
Chy07g01266 264 PANTHER PROTEIN SHORT INTERNODES 1 225 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g00602 Chy07g01266 CCT
Chy02g00602 Chy07g01266 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01412 Chy-Chr3:16854987 Chy07g01266 Chy-Chr7:17371774 4.64E-58 dispersed
Chy05g00162 Chy-Chr5:1286980 Chy07g01266 Chy-Chr7:17371774 3.66E-43 dispersed
Chy07g01266 Chy-Chr7:17371774 Chy10g01367 Chy-Chr10:17909169 5.83E-33 dispersed
Chy02g00602 Chy-Chr2:3653304 Chy07g01266 Chy-Chr7:17371774 1.35E-62 wgd
Chy04g00453 Chy-Chr4:4099929 Chy07g01266 Chy-Chr7:17371774 2.35E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18338 PF05142 DUF702 1.10E-52 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01266 - - csv:101216097 468.774