Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01281 ATGCTAACAGACTTAGAAAATTCAGCCGAAGTCAGTATTTCCTCCACCGGAAATCAACTTCCGCCGACCAAATCTGCCGTGAAAAAAAAGCGTAGTTTACCCGGAATGCCAGATCCGGATGCAGAGGTAATTGCTCTGTCTCCGAAGACCCTTTTGGCTACAAATCGATTTGTGTGTGAAATTTGCAACAAAGGTTTTCAAAGAGATCAGAATCTTCAACTTCACCGACGAGGTCATAATCTTCCATGGAAACTCCGGCAACGGACAAGCAAAGAGGTGAAAAAGAAAGTCTATGTCTGCCCGGAACCGTCGTGCGTCCACCACCATCCGTCGAGAGCTCTCGGGGATCTGACTGGAATAAAGAAGCACTTCTGCCGGAAGCACGGCGAGAAGAAATGGAAGTGTGAAAAGTGCTCTAAAAAATACGCCGTCAAGTCCGATTGGAAGGCCCATTCTAAGATTTGTGGAACCAGAGAGTACAAGTGCGACTGTGAGACTGTGTTTTCAAGAAGAGATAGTTTCATCACTCACAGAGCGTTCTGTGATGTGTTGACGAAGGACGTTGCCGGAAGTTTGTCTCCGGCAGCGGCGGAGATTCCTAATTTGGAGTCCGATTCTCAAGTTCAGCGACCGTCGGGTAGTTCGTCTCCGCCGTCTTCTGCTCCTCCTCTTCCCGCCGGTACCGCTCCCGTCTCAGTAGCCCTTCCTCCATCCACTGACACGATGTCGTCAATCGCGTCTATTGAGAATAAAGCTTCACCGGAAAATCCTCCGCCGCCGCTTGGAGAGGCACAAGACAGAACTAGCCTAACTGGAAACTCCGGCAGCAGCAACACCACAATCAGCAGCACCAATGCTACCGTATTGGCTAGCTTGTTTGCTTCCTCTGCCGCATCACTGAGCTTACAGCCGCCGCAGCCGCCAGCATTTTGCGACTTATTACGAGCCATGGCGCGGCCCGATCGGGCGACTGAAATTGCACCGCCGTTGGTTTTTGAACCTCTTTCTCTATGCCTATCGACCGACACTGAATCGTCGCTTTTCAGAACCGGAATCCAAGATTGCCGCCCATATGTGCCACCGACACCGCCAGCCATGTCCGCCACCGGGCTCCTACAGAAGGCCGCTCAAATGGGCGCTGCGGCGGCGGGCGCATCAGTGTTTCGTGGACTTGGTTTATCGTCTTCCCCTTCTTCTGCACAACAGGGGAGTTTATAA 1218 51.89 MLTDLENSAEVSISSTGNQLPPTKSAVKKKRSLPGMPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSKEVKKKVYVCPEPSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVKSDWKAHSKICGTREYKCDCETVFSRRDSFITHRAFCDVLTKDVAGSLSPAAAEIPNLESDSQVQRPSGSSSPPSSAPPLPAGTAPVSVALPPSTDTMSSIASIENKASPENPPPPLGEAQDRTSLTGNSGSSNTTISSTNATVLASLFASSAASLSLQPPQPPAFCDLLRAMARPDRATEIAPPLVFEPLSLCLSTDTESSLFRTGIQDCRPYVPPTPPAMSATGLLQKAAQMGAAAAGASVFRGLGLSSSPSSAQQGSL* 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17522003 17524434 - Chy7G141110.1 Chy07g01281 231292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01281 405 MobiDBLite consensus disorder prediction 1 40 - -
Chy07g01281 405 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 4 400 - -
Chy07g01281 405 MobiDBLite consensus disorder prediction 1 25 - -
Chy07g01281 405 Pfam Zinc finger, C2H2 type 57 79 IPR013087 -
Chy07g01281 405 MobiDBLite consensus disorder prediction 200 215 - -
Chy07g01281 405 Gene3D Classic Zinc Finger 126 186 - -
Chy07g01281 405 SMART c2h2final6 133 153 IPR013087 -
Chy07g01281 405 SMART c2h2final6 57 79 IPR013087 -
Chy07g01281 405 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
Chy07g01281 405 SUPERFAMILY beta-beta-alpha zinc fingers 56 153 IPR036236 -
Chy07g01281 405 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 4 400 - -
Chy07g01281 405 Gene3D Classic Zinc Finger 37 104 - -
Chy07g01281 405 MobiDBLite consensus disorder prediction 196 279 - -
Chy07g01281 405 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 79 IPR013087 -
Chy07g01281 405 MobiDBLite consensus disorder prediction 234 251 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g00663 Chy07g01281 CCT
Chy02g00663 Chy07g01281 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01477 Chy-Chr3:17237665 Chy07g01281 Chy-Chr7:17522003 3.63E-113 dispersed
Chy07g01281 Chy-Chr7:17522003 Chy11g00664 Chy-Chr11:8175368 3.42E-112 dispersed
Chy02g00663 Chy-Chr2:4027016 Chy07g01281 Chy-Chr7:17522003 2.95E-147 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18344 PF00096 zf-C2H2 0.0039 CL0361 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01281 K25869 - csv:101215476 691.804